| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2705 |
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| Symbol | |
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| ID | 7388365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2241807 |
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| End bp | 2242835 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643651766 |
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| Product | ABC transporter substrate binding protein (spermidine/putrescine) |
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| Protein accession | YP_002549953 |
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| Protein GI | 222148996 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0128801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA TACTTACAAC CGCGATGATC GTTGCAATAA CCGCGTCCTT TGCACACGCA
GAGGAAAAAA CACTCTATGT TGCAGGCTCC GGCGGCTCCA CAGAGGCGTT GTTTAAAGAA
AATATCATCC CGAAATGGGA ACAGCAAAAC AACACCAAGG TTGTTTACAT ATCAGGCAAC
TCAACGGATA CATTGGCAAA ATTACGTGCT CAGGCTGGTG CTCAGCAAAT TGACGTTGCC
ATGATTGACG ATGGGCCAAT GACGCAAGCA ATCCAGTTTG GCTATTGTGC TCCGGTCAAG
TCTGAAACTT TCAAAGACCT ATACGCATCA GCAAAATTGC CCGAAGACAA AGCTGTCGGG
ATCGGTTTCA TTGCCACGGG CCTCGTTTAC AATACAAAAA TGTTTGCTGA CAAAGGTTGG
GCCGCGCCAA CGTCATGGCG CGATCTTGCC GATCCGAAAT ACAAGGGTTT GATCTCGATA
CCACCGATTA CCAATGGATA CGGTTTGCAT GCCCTGATCA TGGAAGCCAA AATCAATGGC
GGTGGTGAAA ACAACATCGA GCCCGGCTTC AAAATGTTCG AAACCGAAAT CAATCAAAAC
GTGTTGGCTT ATGAGCCGTC ACCGGGCAAA ATGTCAGAAC TGTTCCAGAA TGGCGAAATC
GCCCTGGCGG TTTGGGGCAG TGGTCGCGTC AAATCTCTGG CCGATACCGG TTTTCCCGTT
AGTTTTGTGT ACCCCAAGGA AGGTGCCGTT AGTTTGTTGA CAGCAGCCTG TCCTGTGACC
GGCTCAAAAC TGCCAGATCT TGCTCAAAAT TTTATTGGCT ATATCACCTC ACCGGATGTC
CAAAACCTGC TCGTCAAGGC ATTGGGATAT GGTCCGGTCA ATGAAAAGGT CGTGGTGCCT
GACAATGAGA TCGGTGCCTT GCCCGTTGGT GCACAGCGCG TGAACTCCAT GGTCACAATC
GATTACTCCG TCGTGAACAA AGCCCGTGGC GACTGGACGA AGGAATGGAC CAGGCGCGTC
GAGCGCTGA
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| Protein sequence | MKNILTTAMI VAITASFAHA EEKTLYVAGS GGSTEALFKE NIIPKWEQQN NTKVVYISGN
STDTLAKLRA QAGAQQIDVA MIDDGPMTQA IQFGYCAPVK SETFKDLYAS AKLPEDKAVG
IGFIATGLVY NTKMFADKGW AAPTSWRDLA DPKYKGLISI PPITNGYGLH ALIMEAKING
GGENNIEPGF KMFETEINQN VLAYEPSPGK MSELFQNGEI ALAVWGSGRV KSLADTGFPV
SFVYPKEGAV SLLTAACPVT GSKLPDLAQN FIGYITSPDV QNLLVKALGY GPVNEKVVVP
DNEIGALPVG AQRVNSMVTI DYSVVNKARG DWTKEWTRRV ER
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