Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2620 |
Symbol | mgtE |
ID | 7386621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2166802 |
End bp | 2168217 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651701 |
Product | magnesium transport protein |
Protein accession | YP_002549888 |
Protein GI | 222148931 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.475029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA TTGAAGAACA GCTACGCCCG CGTCATTCCC GTGACGAGGA AAAGGCGGAT ATCTACGACG AGGACGGCTC GATCCGCAGC GATTTCCGCG CGCTTGTTGG CGCCGCTATC GCCGATCGTG ATGTGCTGTT CCTGCGCAAG GAAGTTGCGC ATCTGCACGA ATCGGAAATG GGCGACCTGA TTGAGGCGAT CCAGCCGGAT CAGCGTTTGG CGCTGATTAC CCTTCTGGGT GACGATTTTG ACATGACGGC GTTGACCGAG GTGGATGACG CCATCCGCCT TCAGATTGTC GACCAGATGC CGAACGAGCA GATTGCCGCG GCTATCGGCG ATCTCGATTC GGATGATGCC GTCTACATTC TCGAAGACCT CGACGAGGAA GACCGCGACG AAATCCTCGC GCAATTGCCG TTTACCGAGC GGGTGCGGCT GCGCCGCGCG CTGGATTACC CGGAAAGCTC CGCCGGACGG CGTATGCAGT CGGAATTTGT CGCCGTGCCA CCCTTCTGGG CGGTGGGCCA GACCATCGAC TATATGCGCG AAGAAGAAGG TCTGCCCGAG AGCTTTACTC AGATCTTCGT CATTGATCCC ACCTTCAAGC TGTTAGGCGT GGTCGATCTC GACCGAATCC TGCGCACCAA GCGTCAGGTG AAGATCGAAA CCATTATGCG CGAGACCAAC CACCCTATCC CGGCCGAAAT GGACCAGGAA GAGGCGGCGC AACTGTTCGA GCAATACGAT CTTCTCTCCG CCGCCGTGGT CGATGAGGGC GGGCGCCTGG TCGGCGTGCT GACCATCGAT GACGTGGTTG ACGTGATCCA GGAAGAGGCC GAGGAAGACT TGATGCGCCT GGGCGGCGTC GGCGATGAAG AATTGTCGGA CAGCATTCCA GAGACCTCCC GCTCGCGCGT GCCGTGGCTG CTGGTCAATC TGCTGACCGC GTTCCTGGCC GCCTCGGTGA TCTCACTGTT TGAGGCAACC ATTGAGCAGA TCGTCGCGCT GGCCGTGTTG ATGCCGATTG TCGCGGGAAT GGGTGGCAAT GCCGGATCGC AGACCATGAC GGTGACGGTT CGGGCGCTGG CCACCCGCAA TCTCGACATT CACAATGCCT GGCGGGTGGT GCGACGCGAA GCGGGTGTCG GGTTGTTGAA CGGGTTGATC TTCGGTGTGT TGATCGGCGT CATTGCCGGG TTCTGGTTCC ATGATGCAAA TATCGGCGGC ATCATTGCCT CGGCCATGCT GATCAACATG ATGGCCGCCG CCATTGCCGG CATTCTCATT CCGCTATTGC TGGACAAGAT CGGTGCCGAC CCGGCGGTCT CCTCTGCGGT TTTCGTGACC ACTGTCACCG ATATTACCGG TTTCTTTGCG TTTCTGGGGC TCGCCACCTG GTGGTTTGCG ATTTGA
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Protein sequence | MSDIEEQLRP RHSRDEEKAD IYDEDGSIRS DFRALVGAAI ADRDVLFLRK EVAHLHESEM GDLIEAIQPD QRLALITLLG DDFDMTALTE VDDAIRLQIV DQMPNEQIAA AIGDLDSDDA VYILEDLDEE DRDEILAQLP FTERVRLRRA LDYPESSAGR RMQSEFVAVP PFWAVGQTID YMREEEGLPE SFTQIFVIDP TFKLLGVVDL DRILRTKRQV KIETIMRETN HPIPAEMDQE EAAQLFEQYD LLSAAVVDEG GRLVGVLTID DVVDVIQEEA EEDLMRLGGV GDEELSDSIP ETSRSRVPWL LVNLLTAFLA ASVISLFEAT IEQIVALAVL MPIVAGMGGN AGSQTMTVTV RALATRNLDI HNAWRVVRRE AGVGLLNGLI FGVLIGVIAG FWFHDANIGG IIASAMLINM MAAAIAGILI PLLLDKIGAD PAVSSAVFVT TVTDITGFFA FLGLATWWFA I
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