| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2579 |
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| Symbol | |
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| ID | 7386593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2132383 |
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| End bp | 2134149 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651672 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549860 |
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| Protein GI | 222148903 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.385383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGTGG GCCCGTCCCC GGCCTTCATC CAGGCTTTGC AGGCCTATAA GCAGGGCGAT
CTGCGCGCCT GCCTCGACCG CCTGCATCCA CTTTTGAAAA AACGTCCACC GGATGCCAAT
ATGCTGCTGG TGGCGGCGCA ATGCCATGCA AAGCTGGAGG AAAAACTCCA GGCCGCCGAG
CTTTACGCCC GGGTGGCGGA TGTGCAGCCG CAAAATCGCC GGATGTTTCT CCTGATGGCC
GCGCGTTTAT ATATGCAGAT TGATCAGGGG GAGCAGGCGC TTTCCCTGAT CCGCAAAGTG
CCAGAATCCC AAAACCTCGA ATCCCAACAC CTCGCATCAC TCGACCCGGA AGAGCAGAGA
ACCTATCGGC GGCTGCTGCG AGGACAATTG TGCCTCGAGG AAATCGAAGC CAGCGACAAC
GCGCTGCTGG CCAAGATGCG AGAGGGTGCT GATCCGGCAT TTTTCAACAT CGACGATCCC
TACCAGCACA TGCTGTGGTG TGACGACGAG GCAATCAATG GCCACCAAAC CCGGATGGCC
AGCGGAAAGC CGTTTACGGT GCAATCACGC CAGGCACGCC GTAGCCTACC CCATCATTTC
GGGAAAAAAA TCCGTGTCGG TTATCTTTCG TCGGATTTTT CCGACCAGCA TCCAACCATG
CGGCTGTTGC AAAGTGTTTT GCTGGGTCAC GACGCCGCCC GCTTCGATAT CCACCTCTTC
TGTCACACGC CAGAGGATAT CAGGGGGCTG GATCGGGGAC TGCGGCAGAC CTACCCCAAT
CTTCACGACA TCCTGCGCAT GGACGATGGT ACGGCACGCG ATTTCATCCG CAGCTTCGAC
CTGGATATTC TGGTCGATCT CAAAGGCCAT ACCAAAGATG TCCGCGCCGA TCTGATCAAT
AGTGGACTTG CCCGCTTGCA GGTCGCCTAT CTCGGTTTTC CCGGCTCCGC CTATGGGATC
GATTGCGATT ATGTCATCTC CGACCTGATC GTTACGCCGG ACTCATCCAA ACCCCATTAT
CACGAGAGGC TCTGCCGATT GCCGGAAACC TATCAGGCAA ACGACAACCG CTATCGCCCG
CACCCACCGG CCACATCCCG CTCCCTGCTC GATCTGCCGG AAGATGCCTT CGTGCTGGCC
TCCTTCAATA TGGTTCGCAA GATATCTCCG CAAACCGCGC GTCTCTGGGC AAGGATGCTG
GACGCCATTC CCTCATCCAT TCTCTGGGTT CTCTGCGCCG GGCGCGAACA GCGCGACCGC
CTGACCGCAT TCATGACCGG GTGCGGAATC GAACGTTCAC GCCTTTATTT CACTGGCGCC
GAAAGTTACG CGCCGCATAT TGCCCGAATG CAGGCGGCCG ATCTCGGTCT CGATACCTAT
CCCTATAACG GCCACACCAC GACCTCGGAC AAGCTATGGG CGGGCCTGCC GGTCATCACC
TTCAAGGGCA GCAATTTCGC TTCAAGGGTG TCTGAAAGCC TGTTGACCGC GCTCGGCGTT
CCACAATTGG TGGCGGAGAC ACCGGATGAT ATGGTGCGTC TGGCCGCAGA CCTGGCGCAG
GATCGGCCCC GGCTTGCCGC ACTCAGGCAG ACGATTGGGG ACAAACGGCT GCACGCGCCG
CTCTTTGACA CGCAACGGTT CACCCGCCAT CTGGAACGCG CTTTTGAGTT GATGGTAGAA
CGGGAAAAGG CCGGCTTGGA ACCGGATCAC ATCGATGTGC CAGCCCTGCC GAGCCGACAG
GAACCGTTCA GGCAGGATAC TGACTGA
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| Protein sequence | MSVGPSPAFI QALQAYKQGD LRACLDRLHP LLKKRPPDAN MLLVAAQCHA KLEEKLQAAE
LYARVADVQP QNRRMFLLMA ARLYMQIDQG EQALSLIRKV PESQNLESQH LASLDPEEQR
TYRRLLRGQL CLEEIEASDN ALLAKMREGA DPAFFNIDDP YQHMLWCDDE AINGHQTRMA
SGKPFTVQSR QARRSLPHHF GKKIRVGYLS SDFSDQHPTM RLLQSVLLGH DAARFDIHLF
CHTPEDIRGL DRGLRQTYPN LHDILRMDDG TARDFIRSFD LDILVDLKGH TKDVRADLIN
SGLARLQVAY LGFPGSAYGI DCDYVISDLI VTPDSSKPHY HERLCRLPET YQANDNRYRP
HPPATSRSLL DLPEDAFVLA SFNMVRKISP QTARLWARML DAIPSSILWV LCAGREQRDR
LTAFMTGCGI ERSRLYFTGA ESYAPHIARM QAADLGLDTY PYNGHTTTSD KLWAGLPVIT
FKGSNFASRV SESLLTALGV PQLVAETPDD MVRLAADLAQ DRPRLAALRQ TIGDKRLHAP
LFDTQRFTRH LERAFELMVE REKAGLEPDH IDVPALPSRQ EPFRQDTD
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