| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2490 |
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| Symbol | |
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| ID | 7385856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2049163 |
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| End bp | 2050764 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651599 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549787 |
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| Protein GI | 222148830 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATTG GCGTCATCAA TACCGGCGGC ACGATCAGCT GCGTCGGCAA TCCACTGGCT
CCGATGACCA GCACGCAATT CAAGGCAGCC TGCCAGTCCC ATCTCGACCC GATTCTCAAG
CAGAAATTTG CCGATCTGGT GCTGGACTAT GTGACCGACC TCGCCTTTCC CGAAAGCGAG
AGCGGCATGT TGGACAGCAC CAATCTGCAA CCCTCCGACT GGTGCTTGAT TGCTCGCCAT
ATCCTGGAGC GCTACGACAC GGTGGACGGC TGGATCGTAT TGCATGGCAC AGATACCATG
GATTACAGCG GCACAGCCCT GGCCATGCTG CTCTCGCGCG TCAGTGCCGA TGGCACTGTG
CTAGCACAAC TCAGCAAGCC GGTGATCCTC ACCGGCTCAC AAGTGCCGCT GTTTCATTCC
CCCACGCCGG GGGTGATTTC CGGCATGACG TTCAATAGTG ACGCCTTTCA AAATGTCTGT
GGTGCGGTCG CAGCCGCCCA GACTGGCCTT GCCGGTGTCA GTGTATTTTT CGATAGCCAG
TTGATGCGCG GCTCACGGGT GGTGAAAGCC GATGCCAGCC AGTTTCGTGG CTTTTCCAGC
CCGAATTTCC CGGTTGTCGG CCAATATGGC ATCACCCTCG GCCTCAATGC CGACCTTACC
TCGCCGCCGC CTGTGTCCTC CGCCGTCAGT CTGGATGATG AAGCTGCACG GGCAGAAACC
CTGACCCAGT TGCATGCCAT CACGTCCAAC ATAAACAAGG CCCCGGTCAT CACTCTCGGG
GCCTTTCCCG CCTGGTACGA TGCCGCCCAA GGAAAGGCGC TGCTGGCCGA TATGATCCGC
GCCTGCGTGG CCCAGGGCAT TGGCGGATTG GTGCTGCAAG CCTATGGCGC AGGCAATTTT
CCAAGCGGAA ATGCCCGGCA GCCGGACCAG GGCGCTATCT ACAAGGCCTT GGAGGAGGCC
AACCGGGCTG GCGTGGTAAT TGTTGATAAT ACCCAGGTTC TGCAAGGTGC TGTGGACTAT
AATACCTATG CCGCAGGGGC CTGGCTGCCC GCGATAGGCG CATTGAACCC CGTAGATATG
ACCGTCATGG CCTCCCTCGC CAAGCTGACC GTGCTTCTGG CGGCCCGCGA TGCAAATGGC
TGGTCACTGG ACGATGTCAA ATATCTGATG CAGATCCCGC TGGTTGGCGA GATGGCCGAT
ATTGCCCGGC TGGACAGCCG CAGCAATGCC GTGCTTCTTC CCGGCCAATC ACTCACCACA
TTCAATGGTA GCGCCAGCCT GGTGAACGAC CCGATGCTCG GCCCGCAACT GCGAGACAGC
TCCGGCAAGA CGCTTTGGTC AATGCTGGGT GAAAATGAAA AAGCCGCCCT GCCCGGCCGG
TTGCAGATCC GCGACGATGG AAATCTGGTT TTTTATAACC GCAACAATCA GCCCTTGTGG
CAGAGCGAGA CCGGTGAGGA AGGCGCCTCT TCACAATTGC GTCTTGGACA GCCAGACGAA
AACACCGTGT GCTTGAGCGT TTATGATTAC AACCACCGCC AATCGCTCTG GAGCAAGACT
TTTTTGCTTC CATCCGACAG GTATCAAGAC TCGAAGATGT GA
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| Protein sequence | MKIGVINTGG TISCVGNPLA PMTSTQFKAA CQSHLDPILK QKFADLVLDY VTDLAFPESE
SGMLDSTNLQ PSDWCLIARH ILERYDTVDG WIVLHGTDTM DYSGTALAML LSRVSADGTV
LAQLSKPVIL TGSQVPLFHS PTPGVISGMT FNSDAFQNVC GAVAAAQTGL AGVSVFFDSQ
LMRGSRVVKA DASQFRGFSS PNFPVVGQYG ITLGLNADLT SPPPVSSAVS LDDEAARAET
LTQLHAITSN INKAPVITLG AFPAWYDAAQ GKALLADMIR ACVAQGIGGL VLQAYGAGNF
PSGNARQPDQ GAIYKALEEA NRAGVVIVDN TQVLQGAVDY NTYAAGAWLP AIGALNPVDM
TVMASLAKLT VLLAARDANG WSLDDVKYLM QIPLVGEMAD IARLDSRSNA VLLPGQSLTT
FNGSASLVND PMLGPQLRDS SGKTLWSMLG ENEKAALPGR LQIRDDGNLV FYNRNNQPLW
QSETGEEGAS SQLRLGQPDE NTVCLSVYDY NHRQSLWSKT FLLPSDRYQD SKM
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