Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2480 |
Symbol | |
ID | 7385849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2042548 |
End bp | 2043660 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651592 |
Product | membrane protein |
Protein accession | YP_002549780 |
Protein GI | 222148823 |
COG category | [S] Function unknown |
COG ID | [COG4872] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.404247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTATC GGGCGAAACT GAAGAAAGAT CTTGATCGCT GGACCGGCAT GGGCCTGATC AGCAAACAGG CCGCCGAGGC GATGATCGAG GATCATGATG GCCGGGCGGG CAATTTCAAT ATCGGCGGCG TTTTGCTCAT GCTGTCGGCA GTGCTGGTCT CTGCCGCCAT CCTGCTGCTT GTGGCGGCCA ATTGGCAGGC CATTCCGCGC CTGGTGAAGG TGTCTAGCCT GATTCTGCTG ATCTGGGGCT TTCATGGCGG CGCTGCCTTC TGCCTCGCTC AAGGGCGGCA GGCGTCGGGT CATGCCCTTC TGGTGCTGGG AGCAGCCAGT TTCGGCGCAG CACTGTCGCT GGTTGGGCAG CTGTATCACC TGTCGGGTGA CCTTCTCGAT CTGCTTTATC TGTGGATCGG TATGGCAAGC CTGTCCTGCC TATTGTTTCG CTCCGGTGCG ATGGCGGCTT TCGTTGGTGT TCTGGCGCTG GGCTTGGCGG CTGCAACCCT TGACCAGTTT GATTTCTCCT GGACGCTGGA GGCAGTTTGG ACACCGCCCC TTTTGGCTGT GCTCGTTACA GGCTTGGCAC TTTTCACCGG AAACATCCGG GTTCAGCATA TATCCGGCCT GCTGATTCTT GGCTGGCTTG CCTGGATCTA TGCGCAGATC ATGCAGCCAG GCCTTGCCAT GGCCTATGTG GCTTTAGGGG TGGCCGCATT CGCAGCGTCA GCCTTGCCGC TGCTCGCCCG GTATATGTCC GTGCAGATTG CCGGTTTTCA TGCCTTGCTG CTGGCGGCAA TGGGTCTTTT CATCCTCAAT ATTGAGTTTG ATCACGGTTT GCCACTGGCG CTGGTGGCCG TCACTGCGGT TGGTATCTCC ATTGCGGCCC TTGTGCTTCG TGGGCGTCAC GACGGTGTCG TGAGGGCGCT GGCTTATCTG ATTTTCGCAG GCGAGATCCT CTATCTGTCC TTCACAACAA TTGATTCTCT GTTGGGGACA TCGGGCTTTT TCCTGATCGC CGGTGTGATT GTCGCTTTGC TGGCCCTCGG CGTCAGCCAG ATGGAAAAGC TGCTGGGTAC GCGCAAGCGT CCGATGGCGG TTGAAGGACG GGAGCGGTCA TGA
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Protein sequence | MMYRAKLKKD LDRWTGMGLI SKQAAEAMIE DHDGRAGNFN IGGVLLMLSA VLVSAAILLL VAANWQAIPR LVKVSSLILL IWGFHGGAAF CLAQGRQASG HALLVLGAAS FGAALSLVGQ LYHLSGDLLD LLYLWIGMAS LSCLLFRSGA MAAFVGVLAL GLAAATLDQF DFSWTLEAVW TPPLLAVLVT GLALFTGNIR VQHISGLLIL GWLAWIYAQI MQPGLAMAYV ALGVAAFAAS ALPLLARYMS VQIAGFHALL LAAMGLFILN IEFDHGLPLA LVAVTAVGIS IAALVLRGRH DGVVRALAYL IFAGEILYLS FTTIDSLLGT SGFFLIAGVI VALLALGVSQ MEKLLGTRKR PMAVEGRERS
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