| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2448 |
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| Symbol | ppiB |
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| ID | 7386073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2013204 |
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| End bp | 2013677 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651566 |
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| Product | peptidyl prolyl cis-trans isomerase |
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| Protein accession | YP_002549755 |
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| Protein GI | 222148798 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CTGGAAACCA CCAAGGGCAA GGTCGTTATC AGCCTTTTCC CTGATCTGGC CCCCGGCCAT
GTCGCACGCA TCAAGGAATT GGCCCGCGAA GGCGCCTATG ATGGCGTGGT TTTCCACCGC
GTCATTCCCG ATTTCATGGC CCAGACTGGC GACGTGAAAT TCGGCAAGAA GGGTGGCGAA
AGCTTCAATC CGGGCCGCGC TGGCATGGGC GGCTCCGACA AGCCGGACCT GAAGGCTGAA
TTTTCGGCCA CGCCACATGT GCGCGGCACC TGCTCCATGG CCCGTTCGCA AAGCCCGAAC
TCTGCCAATT CGCAGTTCTT CATCTGCTTT ACCGATGCGC CTTGGCTGAA CAAGCAATAT
TCCGTCTGGG GCCAGGTCAT CGAAGGCATG GATGTCATCG ACGCCGTCAA GAAGGGCGAA
CCGGTCACCG ATCCGGATTC GATCATCTCG ATGAAAGTCG CCGCCGACGC CTGA
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| Protein sequence | METTKGKVVI SLFPDLAPGH VARIKELARE GAYDGVVFHR VIPDFMAQTG DVKFGKKGGE
SFNPGRAGMG GSDKPDLKAE FSATPHVRGT CSMARSQSPN SANSQFFICF TDAPWLNKQY
SVWGQVIEGM DVIDAVKKGE PVTDPDSIIS MKVAADA
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