| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2438 |
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| Symbol | sufD |
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| ID | 7386066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2007228 |
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| End bp | 2008502 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651559 |
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| Product | transport system |
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| Protein accession | YP_002549748 |
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| Protein GI | 222148791 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.629208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC AAGCTGCCAA TCGGTCCACA GCGGCCGAGG CTGCGCTGGT CGAAGCCTAT
ACGGCCCAAC TCGGTGATTT GCCGGGCGAT GGGGCCGTGC TGGGCGCGCG GGATATCCTG
TTTGATGACC TGAAGCGGGC TGGCCTGCCA ACGCGTCGCG TTGAAGCCTG GCATTATACG
GATCTTAAAA CCCTGCTACG GGCCATCCCC GACGCTGCAA CGCTAACGCC TTCGAAGGCT
GTGGCACCGC TGGTGGAGGC GGCTCGTATC TTTGAACTGC GCCAGGGCCT GAGCCGCGAC
GTTTCTGCGC CAGATGGCGT GAAGGTCCAT GCCTATAGCG AAAGCCTGCT GGATGGAACG
GCGGCGGCGG ATCTGGTTGC CTTCTCCAAG GACGATACTA TCGGCCGGAT CAATGGCAGT
TTCGTGCGTG ACGGCTATCG GCTGAGCGTC GAGGACAATG TCGAGGTCGA CAGGCTGATC
GAGTTGCAGG CCTATCAGGG TGGCGGTCAG AGCCATTCTC GGTTCGTGGC AAGCTTCGGC
TCTGGCTCAA AGGCAACGGT GATCGAGCGC CATCGCAATT CCGGCGAAAC CGCTGGCCTG
ATCTCCAGCG TCAGCGACCT GGACTTGGGC GAGGGTGCCG AAGTGACGTG GATCATCGTG
CAGACCCAAG GTCTTGCCGA TACCCATCTG GGCCAGATCA AGGTCGTGCT GGGGACCAAT
GCCAAGCTGA AGCTATTTGT GATCAACGCT GGCGGCAAGC TGGTGCGCCA GGAAATCCAT
GTCAGAACGG CAGGCGAGGG CTCCGATTTC ACGCTCCGCG CTGTCAACCT TCTGGGTGGC
GAAAGCCATA CCGATGTCAC CATGACGCTT GGTCATGACG TGCCGAACAC CACCTCGACG
GAAGTGATCC GCAATGTGGT GTTCGACCGG GCGCGTGGCG TCTTCCAGGG CCAGATCCGG
GTTGCTCCCG ACGCCCAGAA GACCGATGCA CGCATGGCCT GCAACACGCT GTTGATGTCT
GACGATGCCG AATATTCGGT CAAGCCGGAA CTGGAAATCT TTGCCGATGA CGTGCAATGC
GCCCATGGTG CAACGGTTGC CGATATCGAC CACAACCACC TCTATTACCT GATGGCGCGC
GGCATCCCGC AAAAAGTCGC CCGTGGGCTG CTGATCAAGG CTTTCGTCAC CGAATTGGTG
GAAGAACTGG AAGATGAGGA ACTGGTCGAG GCCCTGGAAG GGGTGATCTC CGACTGGCTG
GAGACCCATG GCTGA
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| Protein sequence | MNIQAANRST AAEAALVEAY TAQLGDLPGD GAVLGARDIL FDDLKRAGLP TRRVEAWHYT
DLKTLLRAIP DAATLTPSKA VAPLVEAARI FELRQGLSRD VSAPDGVKVH AYSESLLDGT
AAADLVAFSK DDTIGRINGS FVRDGYRLSV EDNVEVDRLI ELQAYQGGGQ SHSRFVASFG
SGSKATVIER HRNSGETAGL ISSVSDLDLG EGAEVTWIIV QTQGLADTHL GQIKVVLGTN
AKLKLFVINA GGKLVRQEIH VRTAGEGSDF TLRAVNLLGG ESHTDVTMTL GHDVPNTTST
EVIRNVVFDR ARGVFQGQIR VAPDAQKTDA RMACNTLLMS DDAEYSVKPE LEIFADDVQC
AHGATVADID HNHLYYLMAR GIPQKVARGL LIKAFVTELV EELEDEELVE ALEGVISDWL
ETHG
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