Gene Avi_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2287 
Symbol 
ID7386373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1878014 
End bp1878481 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content54% 
IMG OID643651453 
Producthypothetical protein 
Protein accessionYP_002549644 
Protein GI222148687 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0140266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTTT TTTCTAGAAG CGCCTTTTGG GCGCTTTTTT TCTATATTGC ACTCACGCTA 
TCCCCGGCTC TGGCTGAGCA ATTTCTCAAA GGGCCAGCTG TCATTCAGAC ACCGACCGGT
CAGCAGCTTC GTCTGAAGAT GGAATACGCG ATCTCCGTTG CACAACGCGA GCAGGGCCTG
ATGGGCCGTA CCAAGCTTGG CCCGAATGAT GGCATGGTTT TCGATTTTGG CGACAGCCGC
AATGTGGTGA TGTGGATGAA AAACACGCCT TTACCGCTGG ATATGCTGTT TATTGATGAA
AAAGGCGTGG TGACCGGTGT TGCGGCGCGT ACAAAACCCT ATTCCGAGGA CTTGATACCT
TCGCCGGGTC CGGTTCGCTA TGTGATTGAA CTGAACGGTG GGCGGGCACA GGCGCTGGGG
ATCGGTCCCG GCAGCATGGT AATACAGGGA ATTGCACCCC CTCCATAA
 
Protein sequence
MLVFSRSAFW ALFFYIALTL SPALAEQFLK GPAVIQTPTG QQLRLKMEYA ISVAQREQGL 
MGRTKLGPND GMVFDFGDSR NVVMWMKNTP LPLDMLFIDE KGVVTGVAAR TKPYSEDLIP
SPGPVRYVIE LNGGRAQALG IGPGSMVIQG IAPPP