Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2287 |
Symbol | |
ID | 7386373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1878014 |
End bp | 1878481 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643651453 |
Product | hypothetical protein |
Protein accession | YP_002549644 |
Protein GI | 222148687 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0140266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTTT TTTCTAGAAG CGCCTTTTGG GCGCTTTTTT TCTATATTGC ACTCACGCTA TCCCCGGCTC TGGCTGAGCA ATTTCTCAAA GGGCCAGCTG TCATTCAGAC ACCGACCGGT CAGCAGCTTC GTCTGAAGAT GGAATACGCG ATCTCCGTTG CACAACGCGA GCAGGGCCTG ATGGGCCGTA CCAAGCTTGG CCCGAATGAT GGCATGGTTT TCGATTTTGG CGACAGCCGC AATGTGGTGA TGTGGATGAA AAACACGCCT TTACCGCTGG ATATGCTGTT TATTGATGAA AAAGGCGTGG TGACCGGTGT TGCGGCGCGT ACAAAACCCT ATTCCGAGGA CTTGATACCT TCGCCGGGTC CGGTTCGCTA TGTGATTGAA CTGAACGGTG GGCGGGCACA GGCGCTGGGG ATCGGTCCCG GCAGCATGGT AATACAGGGA ATTGCACCCC CTCCATAA
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Protein sequence | MLVFSRSAFW ALFFYIALTL SPALAEQFLK GPAVIQTPTG QQLRLKMEYA ISVAQREQGL MGRTKLGPND GMVFDFGDSR NVVMWMKNTP LPLDMLFIDE KGVVTGVAAR TKPYSEDLIP SPGPVRYVIE LNGGRAQALG IGPGSMVIQG IAPPP
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