| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2275 |
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| Symbol | sfsA |
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| ID | 7386364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1866685 |
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| End bp | 1867392 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651441 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_002549635 |
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| Protein GI | 222148678 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0278821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTTCG ATCCACCATT GGTCGCGGCC ACTTTGGTGC GCCGTTACAA ACGCTTTCTC
TTCGACGCCG TGTTGGAAGA CGGCAGCGAC ATCACCGGAT TTTGCGCCAA TACCGGCTCG
ATGCGCGGAT TGACTACGCC CGGTTCGCGT ATCTATCTGT CACAAAGCGA CAGGCCCGGC
CGGAAGTATC GCTATGGGTT TGAGCTGATC GAAGCCGATG GCACTTTGGT CGGTGTCAAT
ACCAGCCTTC CCAACCGTCT GGCTCACGAA GCGATCCGCG CCGGTCTGGT CAGCGATCTC
TTACACTATC CGCAGATCCG CACCGAGCAG CGTTATGGCG AGAACTCCCG GATCGACCTT
CTGTTGTCGG GTTCCGGCAA AGCGGATTGC TATGTCGAAG TCAAGAACGT CCATTTCATC
CGTGAAACAG GACTGGCGGA ATTTCCAGAT AGCGTCACCA CGAGAGGCGC GAAACATTTG
ACCGAAATGG CCAAGCTGGT GGCGGCAGGC AAGCGGGCGG CGATGCTCTA TGTGATCCAG
CGGCAGGATT GCGATGCCCT GGCGATCTGT GCCGATCTCG ATCCCGTCTA TGGCCGGGCC
TTCACCGCCG CCATAAGCCA GGGCGTCGAA GCCTATGCGG TGAAATGCGC GATCACACCT
AGAGGGATCA TTCCGGCATG CGGCGTTCCC GTGCGCCTGA CCGTTTAA
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| Protein sequence | MTFDPPLVAA TLVRRYKRFL FDAVLEDGSD ITGFCANTGS MRGLTTPGSR IYLSQSDRPG
RKYRYGFELI EADGTLVGVN TSLPNRLAHE AIRAGLVSDL LHYPQIRTEQ RYGENSRIDL
LLSGSGKADC YVEVKNVHFI RETGLAEFPD SVTTRGAKHL TEMAKLVAAG KRAAMLYVIQ
RQDCDALAIC ADLDPVYGRA FTAAISQGVE AYAVKCAITP RGIIPACGVP VRLTV
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