Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2217 |
Symbol | nadC |
ID | 7387920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1821598 |
End bp | 1822455 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643651401 |
Product | nicotinate-nucleotide pyrophosphorylase |
Protein accession | YP_002549595 |
Protein GI | 222148638 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCTC ATTCCCTGCC GCGCGTCATC GTCGAGCCGC TGGTGCGCAA TGCACTCTCG GAGGATCTGG GGCTGGCCGG TGATATCACC TCCATGGCGG TCATCCCGGC CGACCATCGT TCGACGGTGC AGATTGCCAG CCGCCGGGAT GGAGTGATTG CCGGACTGGA TGTCAGTGCC ATCGCCTTCG AACTGGTCGA TCCCGGCCTG GTCATGACCC CCCATGTCAG CGATGGCGCG GCGGTCAAGG CGGGCGATGT TCTTGCAACG ATTTCCGGCT CCTCCCGCAG CCTTCTGACC GGCGAGCGGG TAGCCCTGAA CTTTCTCGGT CATCTCTCAG GCATCGCCAC GGTGACGCGC CAAATCGTCG ACGCTGTTTC CGGCACCAAG GCCGCCGTGG CCTGTACACG CAAAACCATC CCGGGCCTGC GGGCGCTGGA GAAATATGCA GTGCGGATGG GGGGCGGAAT GAACCACCGC TTCGCGCTCT ACGATGCCGT GTTGATCAAG GACAATCACG TGGCCATTGC TGGCAGCGTC ACTCAGGCCA TCCTGCGGGC GCGGGGCGGT GTCGGGCATA TGGTCAAGAT CGAGGTGGAA GTCGATACGC TGGATCAATT GCGTGAAGCG ATGGAGATTG GCGTCGATGC CGTGCTTCTG GACAATATGA CGCCGGAGCA ATTGCGCGAG GCGGTGGAGA TTGTCGCGGG CCGGTCGATC ACCGAGGCCT CCGGCGGCAT TACACCGCAA ACGGCAAGGG CCGTGGCGCA AAGCGGCGTC GATTTGCTAT CGGTCGGCTG GATCACCCAT AGCGCGCCGG TGCTGGATAT CGGCCTGGAT TTTGTCGAGG CGGAATGA
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Protein sequence | MFSHSLPRVI VEPLVRNALS EDLGLAGDIT SMAVIPADHR STVQIASRRD GVIAGLDVSA IAFELVDPGL VMTPHVSDGA AVKAGDVLAT ISGSSRSLLT GERVALNFLG HLSGIATVTR QIVDAVSGTK AAVACTRKTI PGLRALEKYA VRMGGGMNHR FALYDAVLIK DNHVAIAGSV TQAILRARGG VGHMVKIEVE VDTLDQLREA MEIGVDAVLL DNMTPEQLRE AVEIVAGRSI TEASGGITPQ TARAVAQSGV DLLSVGWITH SAPVLDIGLD FVEAE
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