| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2185 |
|---|
| Symbol | znuC |
|---|
| ID | 7387897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1799008 |
|---|
| End bp | 1799958 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643651378 |
|---|
| Product | ABC transporter nucleotide binding/ATPase protein (zinc) |
|---|
| Protein accession | YP_002549572 |
|---|
| Protein GI | 222148615 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.287969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGGTG AAAAGCCATT GGTGACATTG CGCAATGCTG GCATCAGGCG CGGCGGGCGC
TGGCTGGTGC GCGGTGTCGA GCTTTCGATC CGCAAAGGCG AACTTGTCAC CCTGATCGGC
CCAAACGGAT CGGGCAAATC GACAACAGCG AAAATGGCGC TTGGCGTGCT GAAGCCCGAT
GAGGGTGAGG TGGTGCGCGA GCGGCCGTTT ACGGTTGGTT ATGTGCCGCA AAAACTGAGC
ATCGACTGGA CCATGCCGCT CACGGTTGAC CGGCTGATGA CCCTGACTGT CAAGCTGTCC
AAGGCTGAGA TCGAGGCTGC TTTGGATTCT GTCGGGATTG CCCATCTGCT GCGCGCCGAA
GTCCAGCATC TGTCCGGTGG CGAGTTTCAG CGGGCGCTGC TGGCGCGGGC TCTTGCCCGC
AAGCCGGACC TGCTGGTGCT GGATGAGCCG GTGCAGGGCG TCGATTTTGC CGGTGAAATC
GCCCTTTACG AATTGATCGC CGATATCAGG CGCAAGACGG GTTGCGGCGT GCTGTTGATT
TCCCACGATC TGCATATGGT GATGGCAGAG ACCGATATTG TCGTCTGCCT GAATGGACAT
GTCTGCTGCC GTGGCACACC GGATGTCGTC AGCCAAAGCC CGGAATATCA GCGGCTTTTC
GGGGCTGCTG CGGCGCGCAC GCTTGCGGTC TATAATCACC GCCATGACCA CACGCATCTG
CCGGATGGCC GGGTCCAGCA CCTCGATGGG TCGGTGACAG ATCACTGCCA TCCTGATGAC
GGCCATCATC ATGGCCGGGG TGAGGAGGGC CATCATCATG GCTTGGGTGA GGAGCACCAT
CATCGCCATC ACGATGACAC GCTTGAGCTT GAAGAGAACC ATCATGATCA TCACCACCAC
GGCGAAGGGC CGTCGGTGAC GTCGGGGAGG GGTGATCGTC ATGATGGATG A
|
|---|
| Protein sequence | MLGEKPLVTL RNAGIRRGGR WLVRGVELSI RKGELVTLIG PNGSGKSTTA KMALGVLKPD
EGEVVRERPF TVGYVPQKLS IDWTMPLTVD RLMTLTVKLS KAEIEAALDS VGIAHLLRAE
VQHLSGGEFQ RALLARALAR KPDLLVLDEP VQGVDFAGEI ALYELIADIR RKTGCGVLLI
SHDLHMVMAE TDIVVCLNGH VCCRGTPDVV SQSPEYQRLF GAAAARTLAV YNHRHDHTHL
PDGRVQHLDG SVTDHCHPDD GHHHGRGEEG HHHGLGEEHH HRHHDDTLEL EENHHDHHHH
GEGPSVTSGR GDRHDG
|
|---|
| |