| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2165 |
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| Symbol | pcs |
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| ID | 7387880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1778556 |
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| End bp | 1779281 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651361 |
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| Product | phosphatidylcholine synthase |
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| Protein accession | YP_002549555 |
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| Protein GI | 222148598 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1183] Phosphatidylserine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0811902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATTT TCAACTATAA GCGCGTACCC TATGCAGAGA TGCGCGCGTT CTCCGTGCAT
ATTCTGACAG CCTCCGGCTC GTTCCTGGCA TTTTTGGGCG TCGTCGCTGC GGCGGAACAT
CGCTTTGTCG ATATGTTCTG GTGGCTTGGC CTGGCGCTGG CTGTGGATGG CATTGACGGG
CCAATTGCCC GCAAGGTCAA GGTCAAGGAA GTCCTGCCCA ATTGGTCCGG CGATACGCTC
GATAATATCA TCGACTATGT GACCTATGTG CTGCTACCCG CTTTTGCGCT TTACCAGAGC
GGTATGATCG GCCAGCCTTG GTCTTTCGTC GCTGCCGGAA TGATCGTGGT GTCCAGCGCC
ATCTACTATG CCGATATGGG CATGAAGACC GACGAATATT TCTTCTCCGG CTTTCCAGTC
GTTTGGAATA TGATCGTTTT TACCCTGTTC GTCATCGATG CCTCTGCAAC GACCGCGATG
ATTGTGGTCG GCATTTCCGT AGCGCTGACC TTCCTGCCGA TCAGCTTTCT GCATCCCGTC
CGGGTCAAGC GGCTGCGACC GCTTAATCTG GCGGTGTTCT TCCTGTGGTG CGGACTGGGT
GGCGCGGCGT TGCTGATGCA TTTCCAAACG CCGTCTTTCC TGGTCATCCC CTTCATTATT
AGCGGCATTT ACCTCTATGT GATTGGTGGA ATTCTCCAGG CTTTTCCGTC GCTTGGCCGC
AGTTGA
|
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| Protein sequence | MKIFNYKRVP YAEMRAFSVH ILTASGSFLA FLGVVAAAEH RFVDMFWWLG LALAVDGIDG
PIARKVKVKE VLPNWSGDTL DNIIDYVTYV LLPAFALYQS GMIGQPWSFV AAGMIVVSSA
IYYADMGMKT DEYFFSGFPV VWNMIVFTLF VIDASATTAM IVVGISVALT FLPISFLHPV
RVKRLRPLNL AVFFLWCGLG GAALLMHFQT PSFLVIPFII SGIYLYVIGG ILQAFPSLGR
S
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