| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2158 |
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| Symbol | metS |
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| ID | 7387874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1771057 |
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| End bp | 1772634 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651354 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_002549549 |
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| Protein GI | 222148592 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.99655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA CGTTCTACAT CACCACCGCC ATTTCCTACC CGAACGGCAA GCCGCATATC
GGCCATGCCT ATGAGCTGAT CGCCACGGAT GCGATGGCGC GCTTCCAGCG GCTGGATGGC
AAGGATGTGT TCTTCCTGAC CGGCACCGAC GAACATGGCC AGAAAATGCA GCAGACCGCC
CGCAACGAAG GCATTGCGCC AGAGGAACTG GCGAAGCGCA ATTCTGACGA ATTCCGCGCC
ATGGGCAAGC TGCTCAATGC CTCCAACGAC GATTTCATCC GCACCACGGA AGCCCGCCAC
CACGCCGCCA GCCAGGAAAT CTGGAAGCGG ATGGAGAAAA ACGGCGATAT CTACAAGGAC
AGCTATGCGG GCTGGTATTC GGTGCGCGAC GAGGCCTATT ACGCCGAAGA CGAAACCGAA
ATGCGCGCCG ATGGCGTTCG CTATGGGCCG CAAGGCACGC CGGTGGAATG GGTGGAGGAG
GAGAGCTATT TCTTCCGACT TTCAGCCTAT GAAGACAAGC TGCTGAAGCT CTACGAGGAT
CAGCCGGATT TCATTGGCCC CAATGAGCGC CGCAACGAGG TGCTGTCCTT CGTTAAGTCC
GGTCTCAAGG ACCTGTCGAT GTCGCGCACC ACCTTCGATT GGGGTATCAA GGTGCCCGGC
GATGACAAGC ATGTGATGTA TGTCTGGGTT GATGCGCTGA CCAATTACAT CACCGCCACC
GGCTATCTGA CCGATGAAAA TGGGCCGCGC GCCAAATACT GGCCGGCAGA CGCCCATATC
ATCGGTAAGG ATATCATTCG ATTCCACGCC GTCTATTGGC CAGCTTTCCT GCTGTCGGCG
GGTGTTGCGT TGCCTAAGCG AATTTTTGCC CATGGATTCG TTCTGAACAA GGGCGAGAAG
ATGTCAAAAT CGCTCGGGAA TGTGGTTGAC CCCTTTGACC TGTTGCAGCA GTTCGGTCTT
GATAACGTCC GTTATTTCCT GTGCCGCGAA ATTTCTTTTG GGCAGGACGG CAACTGTAAT
GCTGAGCTTA TTGCTCCGCG TATCAATGCC GATCTCGCCA ACGGCATCGG CAATCTCGCC
AGCCGTTCGC TGTCGATGAT CGCCAAGAAT CTTGACGGCA AGGTGCCGCA GCCCGGCCCT
CTGACCGAGG CTGACGAGGC TATTCTCGCC ACGGCGGATG AAGCGATTGC CATTTGCCGT
GAGGAAATGT CTCGCCAGCA GATCCACAAG GCGGTGGGCG CGATCATGAA CATCGTCAAC
GAAGCCGACC GCTATTTTGC CGCCCAGGCC CCTTGGGTGT TGCGCAAGAC GGATGTGCCG
CGCATGGAAA CCGTGCTGTA TGTGACGGCG GAAGTGGTGC GGCAGATCGC CATCCTGTTC
CAGCCGATCA TGCCCGACAG TGCGGCGAAG CTGCTTGATC TCGTGGCAAT CGCGCCGGAT
GATCGGGTGT TCGCCAAACT GGGCAAGGCG GGTCGCCTGA CGCCCGGCAC GGAGCTTCCT
GCCGTGTCAC CGGTCTTTCC GCGCTACGTT GCCCCAGATG CAGACAAAGC AGCGGACAAA
GCAGCGGACA GGGCCTGA
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| Protein sequence | MKDTFYITTA ISYPNGKPHI GHAYELIATD AMARFQRLDG KDVFFLTGTD EHGQKMQQTA
RNEGIAPEEL AKRNSDEFRA MGKLLNASND DFIRTTEARH HAASQEIWKR MEKNGDIYKD
SYAGWYSVRD EAYYAEDETE MRADGVRYGP QGTPVEWVEE ESYFFRLSAY EDKLLKLYED
QPDFIGPNER RNEVLSFVKS GLKDLSMSRT TFDWGIKVPG DDKHVMYVWV DALTNYITAT
GYLTDENGPR AKYWPADAHI IGKDIIRFHA VYWPAFLLSA GVALPKRIFA HGFVLNKGEK
MSKSLGNVVD PFDLLQQFGL DNVRYFLCRE ISFGQDGNCN AELIAPRINA DLANGIGNLA
SRSLSMIAKN LDGKVPQPGP LTEADEAILA TADEAIAICR EEMSRQQIHK AVGAIMNIVN
EADRYFAAQA PWVLRKTDVP RMETVLYVTA EVVRQIAILF QPIMPDSAAK LLDLVAIAPD
DRVFAKLGKA GRLTPGTELP AVSPVFPRYV APDADKAADK AADRA
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