| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2131 |
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| Symbol | ispDF |
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| ID | 7387852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1745651 |
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| End bp | 1746874 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651332 |
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| Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
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| Protein accession | YP_002549527 |
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| Protein GI | 222148570 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCATA TTCAAGCGGA CGGGGCAAGG TCAACAGCGG TGATATTGGT CGCGGCAGGC
CGGGGAGAGC GCGCTGGCGC CTCCAGCGAG GGACCGAAGC AATATCGGCG GATCGGCGGA
AAGCCTGTTA TTGTCCATAG CCTGCTAGGC TTCGCAGATC TTCTCCCGCA GGCGACCCTG
ATCGTCGTCA TTCATCCCGA TGACGGGGCC TTGCTGGCCA ATGCTCTAGC CCCCTATCCC
CAGCTCGCTG CCTCTCTGAC CATCACCCAC GGCGGCAAAA CCCGGCAGCA ATCGGTTCTG
GCTGGCTTGA GAGCCTTGCG GAATCAAAAG CCGGATTATG TGCTGATCCA TGACGCGGTG
CGACCGTTTT TCGATCAGCT GATGCTGCAA CGAATTATCG CCCGGCTTGA CGACGGTGCC
GATGCCGTCT TGCCCGCCAT CCCGGTGACC GATACGCTTA AACGTGGCGA TGAGGGTGCG
CGAGTCGTCG ATACTGTGGC GCGCAGCGGA CTTTTTGCAG CACAAACACC GCAGAGCTTC
CACTTTGCCA AAATACTGGC TGCTCACGAA GACGCCGCAA GCGCTGGACG AGAGGATTTC
ACCGATGACG CCGCCATCGC CGAATGGGCG GGACTAACTG TCCATCTGGT GGAAGGCTCG
CCTGACAATG TAAAACTGAC CGTGAAACGG GATCTTGAAA TGGCCGATGC CCGCCTCTCT
CATAACGCTT TGCCTGATGT GCGCACCGGC AATGGCTATG ATGTCCACCA ACTGGTGCCG
GGCGATGGCG TAACGCTTTG CGGCATTTTC ATTGCCCATG ACCAGGCCTT GAGCGGACAT
TCCGATGCCG ATGTCGCCTT GCACGCCCTG ACCGATGCGC TACTGGCCAC CTGCGGGGCT
GGCGATATCG GCGACCATTT CCCGCCATCA GACCCGCAAT GGCGCGGTGC CGCGTCGCGG
ATCTTCCTGG AGCATGCAGC AAACATCGTG CGCGATGCGG GCGGTACAAT CATGAATGCT
GACATCTCGC TGATTGCAGA AGCACCAAAA ATCGGCCCGC ATCGCCAGAT CATGCGCGAA
AAGCTTTCCG AGATTCTCGG CATTGCGCTG GAGCGCTGCT CTGTCAAAGC GACGACCAAC
GAGAAAATCG GCTTTGTCGG CCGGGGCGAA GGTATTGCAG CCATTGCCAC TGCCACGGTG
GTTTTCCAGG GAAAGCCACA ATGA
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| Protein sequence | MVHIQADGAR STAVILVAAG RGERAGASSE GPKQYRRIGG KPVIVHSLLG FADLLPQATL
IVVIHPDDGA LLANALAPYP QLAASLTITH GGKTRQQSVL AGLRALRNQK PDYVLIHDAV
RPFFDQLMLQ RIIARLDDGA DAVLPAIPVT DTLKRGDEGA RVVDTVARSG LFAAQTPQSF
HFAKILAAHE DAASAGREDF TDDAAIAEWA GLTVHLVEGS PDNVKLTVKR DLEMADARLS
HNALPDVRTG NGYDVHQLVP GDGVTLCGIF IAHDQALSGH SDADVALHAL TDALLATCGA
GDIGDHFPPS DPQWRGAASR IFLEHAANIV RDAGGTIMNA DISLIAEAPK IGPHRQIMRE
KLSEILGIAL ERCSVKATTN EKIGFVGRGE GIAAIATATV VFQGKPQ
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