| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2055 |
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| Symbol | |
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| ID | 7386870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1687308 |
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| End bp | 1687796 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643651279 |
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| Product | transcriptional regulator AsnC family |
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| Protein accession | YP_002549474 |
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| Protein GI | 222148517 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.381037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGTC TGGACCGTAA AATTCTGCGT ATTTTGCAGG AGGATTCCAC TCTTGCCGTT
GCTGACCTCG CCAAGAAGGT CGGTCTTTCC ACCACGCCCT GCTGGCGGCG TATCCAAAAG
ATGGAAGAAG ATGGCGTGAT CAAGCGCCGT GTAGCGCTGC TTGATCCGGT CAAGGTCAAT
ACAAAGGTGA CGGTGTTCGT TTCGGTGCGC ACCAATACCC ATTCGATTGA ATGGTTGAAG
CGGTTTTCCG AAGTGGTGGC GGAATTTCCC GAAGTGGTCG AATTCTATCG CATGAGCGGC
GATGTGGATT ACCTGCTGCG GGTCGTGGTG CCTGACATCG GTGCCTATGA TGCCTTCTAC
AAGCGGCTGA TCGCCAAAAT CGAGATCCGC GACGTATCCT CTGCCTTCGC CATGGAGCAG
ATCAAATACA CGACCGAATT GCCGCTCGAT TACATGATGC TCGATAATAA CAAGTCTGGC
GAAGAATGA
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| Protein sequence | MDRLDRKILR ILQEDSTLAV ADLAKKVGLS TTPCWRRIQK MEEDGVIKRR VALLDPVKVN
TKVTVFVSVR TNTHSIEWLK RFSEVVAEFP EVVEFYRMSG DVDYLLRVVV PDIGAYDAFY
KRLIAKIEIR DVSSAFAMEQ IKYTTELPLD YMMLDNNKSG EE
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