| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2028 |
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| Symbol | hemN |
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| ID | 7386849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1665809 |
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| End bp | 1667161 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651257 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_002549453 |
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| Protein GI | 222148496 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCCA AAGCGCTTCT CTCAAAATAT GCCGCCGCCG TTCCGCGCTA CACGAGTTAT
CCGACGGCGC CGCATTTTCA TACCGGTGTT GACTGTGGCA ATTATGCGCA GTGGTTATCG
CTGTTGGGGC AGGGGCAGAC GATCTCTCTT TATATTCATA TCCCCTACTG CGACAGGCTT
TGCTGGTTTT GCGCCTGCCA TACCAAACAT ACACTAAAGT ATGAGCCGAT AACCGCTTAT
CTTACTGCGC TTTTCAGAGA GGTCGAAAAT ACCGCCAGGT TCGTCGGTCG CGAAGCAGTG
GTGACTGCTG TGCATCTTGG CGGTGGCTCT CCCACCATGC TGCGCCCGCA GGACATGGTG
GCGCTGATTG ACCGGCTTCG GGCAAATTTT ACATTTGCCG ATGATGCGGA AATCAGCGTG
GAGATGGACC CGAACGATCT CGACGAAGCT CGATATGATG CGCTTGCATC CATTGGTTTG
ACGCGGGCAA GCCTAGGTGT TCAGGATTTC GACCCGGTGG TTCAGAAGGC GATCAACCGT
CTCCAAACCT TCGAACAGAC TAAATCAGTG GTTGAACAGG TGCGTCTGCG CGGCGCCACC
TCGGTCAATT GCGATATTCT CTATGGTCTT CCTTATCAGA CCCTCGAAAG TCTGGAGAAA
ACTGTCCTCG ATATCGTATC GTTGAAGCCG GATCGGATTG CGTTATTCGG CTATGCTCAT
GTCCCCTGGA TGAAAAAGCA TCAAACGCTG ATTCCCGAGA GCGCCTTGCC TGATATCGTC
ATGCGCTATG AACAGATGGT GCGGGCCTCT GCCATGCTGG TGGAGGCTGG CTATGATGCC
ATTGGCATCG ACCATTTTGC ATTGCCCGAG GATAGTCTGG CTGTCGCGGC ACGGCAGAAA
CGGCTGCGGC GTAATTTTCA GGGTTATACG ACTGACGGCG CCGATGCGTT GATTGGACTT
GGCGCCTCTT CGATCAGCCA ACTGCCGCAA GGCTATGTAC AGAACATGCC CGCGACTGGA
GAATATCAGC GTCTTGTCAG CGAAAACGGG CTTGCCGCGA CACGAGGCAT TGCTCTGAGC
GGCGATGACC GAGTGCGTGC CGCTGTCATC GAGCAGATCA TGTGCGAGTT CGGCTTTTCC
TTTGCCGATA TCCGTCAGGC TTTTCCTGAT GTCGCCGAGG ATGTGATCGC AGAAGCCAAG
ATATTCACGG CTTCCAACGG TGACGATCTC TGCCGGATCG ACCGGGAGTG TTTTACTCTG
ACTCCCACCG GGCGGCTCTT TGCCCGCAGC ATTGCGGCCA CGTTCGATTG CTACTTTTCC
AGCGGTAAGG CCCGTCATTC CATTGCTGTT TGA
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| Protein sequence | MPAKALLSKY AAAVPRYTSY PTAPHFHTGV DCGNYAQWLS LLGQGQTISL YIHIPYCDRL
CWFCACHTKH TLKYEPITAY LTALFREVEN TARFVGREAV VTAVHLGGGS PTMLRPQDMV
ALIDRLRANF TFADDAEISV EMDPNDLDEA RYDALASIGL TRASLGVQDF DPVVQKAINR
LQTFEQTKSV VEQVRLRGAT SVNCDILYGL PYQTLESLEK TVLDIVSLKP DRIALFGYAH
VPWMKKHQTL IPESALPDIV MRYEQMVRAS AMLVEAGYDA IGIDHFALPE DSLAVAARQK
RLRRNFQGYT TDGADALIGL GASSISQLPQ GYVQNMPATG EYQRLVSENG LAATRGIALS
GDDRVRAAVI EQIMCEFGFS FADIRQAFPD VAEDVIAEAK IFTASNGDDL CRIDRECFTL
TPTGRLFARS IAATFDCYFS SGKARHSIAV
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