| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1989 |
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| Symbol | |
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| ID | 7387265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1633668 |
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| End bp | 1633850 |
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| Gene Length | 183 bp |
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| Protein Length | 60 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651228 |
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| Product | endo-polygalacturonase precursor protein |
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| Protein accession | YP_002549424 |
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| Protein GI | 222148467 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCGCATG TCACGCTGGG GCCTGGTTCG GTCAGCTTTG CCGACCTTCT GAAGGCAGAC
CCAGCGCGCC GGGTGAAAAC TGTCAATCTC GTGGATGCCA GCGAGGAAGA TCCGGTTCCG
CCGCTTGATT GCTCGTCGGC TTTCGTGCCG TTTTCGAGCT TTTTGGAGGG GCCCCCGTTT
TGA
|
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| Protein sequence | MPHVTLGPGS VSFADLLKAD PARRVKTVNL VDASEEDPVP PLDCSSAFVP FSSFLEGPPF
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