| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1968 |
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| Symbol | |
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| ID | 7387254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1623281 |
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| End bp | 1624588 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651217 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549413 |
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| Protein GI | 222148456 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCCA AGAAAGGCAA GGCCGAGCGG CGTTCAACGT CGCTCGAAAG CGAAACCGTG
CCGGTCAGCG CCACCAATTT TATGGAGTTC TTCGGGCTTG GCGGCGGCGC ACTGCCCACG
GTCAATATCG AAACGGCCCT GAAAGTCCCG GCTGTGCAGG CGGCGGTATC GTTTCTGTCG
CGGACCCTCG CAACACTTCC GCTGCATGTC TACCGGACGG GCGAACGCGG ACCGGTGCGG
CTCGGCGGAA AGCTGGCTGT CGTTCTGGAG GAAAACCCGA ATGACGAAAT GGACACCTCA
AAGTTCCGGC GCTTCTTCTG GGAACAGGTG TTTACCGGCG GGCGGGGGCT GGCCTGGATC
GAGCGCAAGG GTGCTGGCAT CGAGGCGCTT TGGCCGATTG ATCCCGGCAG CTGTTCGATC
AGGCGGCGTG GCGGGCGGCT GTTCTACAGT TTCGAGGGCA GGGAATATCC AGCCACCGAC
GTGATCGACA TCCCCTATAT GCTGAAGCGT AATCTGGTCC AGCATCGCGG CCCGATTGCC
ATGGCGGAAA AGGCCATCCA ACTGGCGCTG GCCATGAACG ACTATGCCTC GAACTTCTTT
GCAGGCGGCG GCGTTCCGCC CTTGGCGCTG GAAGGGCCGA TGCCTGCCAA TGACAAGGCC
ATGCAGCGGG CGCGTGAAGA TATCAAGCGG GCGGTGAAGG CGGCGCGAGA CGATCAGCTT
CCGCTGATCC AGTTGCCGGT CGGCTACAAA CTCACCCAAG TGGGTTACGA CCCGGCCAAG
GGGCAGATGA CCGAGGCGCG GCTTTACCAG GTGCAAGAGA TTGCCCGCGC CTATCAGATC
CCGCCGAACT TCCTTCAGGA CTTGAGCCGA GCAACCTTCT CCAATGTCGA GCAGAACGAC
CTCTATCTGG TCAAGCATCT GGTCAGCCAA TGGGCGACGG CGATGGAAGG GGAAATGAAC
CTGAAGATTT TTGGGCGGAT GAATACCCGC CGTTATGTCC GCCACAACCT CGACGGCCTG
ATGCGCGGTG ACTTCAAGAG CCGGTTGGAA GCCTTAGCAA CCGGCGTCAA TTCGGCGCTG
CTGACCCCGA ACGAGGGCCG AGAGATTGAA GGCCGTCCAC GTGATCCGAA CCCGGCTGCC
GACCAACTCT ACATCCAGGG CGCAACCGTC GCCATCGGCA CCAGTGTCAT CGACACAAGT
GCCCCCGGCA CAAATGCGAT GGGCGAGAAT AGCGACCCGC CGCTCAATGA TCCCGCAGCA
GACACAGAAA GGCAGGTGAC CGATGACACC GAAACCGAAA CCGGGTGA
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| Protein sequence | MASKKGKAER RSTSLESETV PVSATNFMEF FGLGGGALPT VNIETALKVP AVQAAVSFLS
RTLATLPLHV YRTGERGPVR LGGKLAVVLE ENPNDEMDTS KFRRFFWEQV FTGGRGLAWI
ERKGAGIEAL WPIDPGSCSI RRRGGRLFYS FEGREYPATD VIDIPYMLKR NLVQHRGPIA
MAEKAIQLAL AMNDYASNFF AGGGVPPLAL EGPMPANDKA MQRAREDIKR AVKAARDDQL
PLIQLPVGYK LTQVGYDPAK GQMTEARLYQ VQEIARAYQI PPNFLQDLSR ATFSNVEQND
LYLVKHLVSQ WATAMEGEMN LKIFGRMNTR RYVRHNLDGL MRGDFKSRLE ALATGVNSAL
LTPNEGREIE GRPRDPNPAA DQLYIQGATV AIGTSVIDTS APGTNAMGEN SDPPLNDPAA
DTERQVTDDT ETETG
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