| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1910 |
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| Symbol | |
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| ID | 7387217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1581106 |
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| End bp | 1582347 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643651179 |
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| Product | GGDEF family protein |
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| Protein accession | YP_002549376 |
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| Protein GI | 222148419 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.382207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTTTAC TCTTCAATAT TCCAACGCTG ATGATCTGCC TCTTGGTCGG ATGGACCTTG
AATTCTGTCC TGATGAGCAT CAGTTGGTTT TTCGACCGTA AATCCAACCA GTTGGGTATG
TGGAGTATCG GTTTTTGGTG TGTTTCAATC GGTACATGCT TGCAGGCTTT GCGCGGTATC
GTTCCTGAAT CTCTTGGTAT CGGGGTTGGT GGAGCACTGG TGCTTTTGGG GTCCGGACTG
GTGTGGGTTG GGTTTCGGAT CTTCGATGGA TTTTCCCGTT CCCGATGGTT TGTGGTCGCA
ATAACTGCGA TTTGGCTCCT ATGCTATTTT GGAGTGAAGA TTTTTTCCGC CAATCCGGAT
TACAGAATCG TCCTCTACAC AATTTTGACT GTTGCGCAGC TCAGCGCTTT GGTCGCTTCG
ATTTGGTCCG GGTGGAAGCG TGACCATTTT CCAGTTCGCC TCGTCATTAT CTTCATGCTG
CTGTCCTACG GCTTCGTCAT GTTGATGCGC ATTCCGCTGG TGATGATCTG GCCGGTGACC
GAGATTGGTG GCGTTGCCCA AACGCCATGG GTTCCGGTTG TTACCTTTAT TTTATACGTC
AACAGCCTTG GGCTGGGGAT TGGCATTTTT GCGCTCAGCA GCCACCGAAG CCTCATGCAG
TATAAGCATG CCTCCGAGAT CGACATGCTG ACCGGTGTTC TCAATCGCCG CGCTTTCTAT
GAGCGTGCCC AGTCACAAAT GCACAAGAAT GCCGGTGTTC TGGCGTTGAT CGATCTCGAT
CATTTCAAAT ACATCAACGA TGCGCATGGA CATGCCGGAG GGGACGCAGC CTTGTGTGCC
TTCGGGAAAA CGATGATCGA GCAACTCGAT GCGAACATGG TGTTTGGCCG GCTTGGCGGG
GAAGAGTTTG CTTTGTTCAT GCCGCAAATG ACAGGTGGTG AAGCGCTGTC CTTTTGCGAT
GGGTTGCGGC AATCCGTTGC CCGGCTCACC ACACCCTGGC GTGACGCGAC AATCACCATG
ACCATCAGTA TCGGCATGCA TGAGGTGGTC AAAGCTGGCG CGGATCTGGA TGCGGTGTCT
CTTCGGGCGG ATGCAGCGCT TTACCAGGCT AAGGATCAGG GACGGGATCG TTGTATTTTG
AGCGCTGCGG AGGAAGCCGT GGCGCAGAAA CCGGAGGAGG GGATGGCGGC CGTCATCGCG
CTTACCGGTG CAAAACCAGC GGCGGTACCT GAACTATCGT GA
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| Protein sequence | MVLLFNIPTL MICLLVGWTL NSVLMSISWF FDRKSNQLGM WSIGFWCVSI GTCLQALRGI
VPESLGIGVG GALVLLGSGL VWVGFRIFDG FSRSRWFVVA ITAIWLLCYF GVKIFSANPD
YRIVLYTILT VAQLSALVAS IWSGWKRDHF PVRLVIIFML LSYGFVMLMR IPLVMIWPVT
EIGGVAQTPW VPVVTFILYV NSLGLGIGIF ALSSHRSLMQ YKHASEIDML TGVLNRRAFY
ERAQSQMHKN AGVLALIDLD HFKYINDAHG HAGGDAALCA FGKTMIEQLD ANMVFGRLGG
EEFALFMPQM TGGEALSFCD GLRQSVARLT TPWRDATITM TISIGMHEVV KAGADLDAVS
LRADAALYQA KDQGRDRCIL SAAEEAVAQK PEEGMAAVIA LTGAKPAAVP ELS
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