Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1908 |
Symbol | |
ID | 7387215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1578251 |
End bp | 1578811 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651177 |
Product | hypothetical protein |
Protein accession | YP_002549374 |
Protein GI | 222148417 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCAT CGCAAGCAGA AATTTTGATC GTTCCCGGCT ATACCAATTC CGGGCCGGAC CATTGGCAAA GCCGTTGGGA GGGCAAATTG TCCACCGCGC GCCGCGTTGA GCAGGCCGAA TGGGCAAAGC CTGTCCGGGA AGATTGGGTG AAGCGGCTGG TGGAAGAGGT CAACCGTGCC GAAAAACCTG TCGTGCTGGT GGGCCACTCG CTGGGTGTGC CAACGATCGT GCATGCCGTG CCGCATTTCC AACGCAAGGT GGCCGGTGCC TTTCTCGTGG CGCCGCCGGA CGTGGCCAAT TCGGCAATCC GGCCCCGCCA CCTGATGACG TTCGGTCCCT ATCCCCGTAC GCCCCTGCCT TTTCCAACAC TGATCGTCGC CAGCCGCAAC GATCCGTTTG GCACCTATGA CCATGCCGAG GATATTGCAA AGGCTTGGGG AGGACTTGTC GTCGATGCAG GCGAGGCAGG CCATCTCAAT GCCGAGTCCG GTCATGGTCC CTGGCCGGAA GGCACCATGG TGTTTGCTCA GTTTCTCAGC AAGCTTTCCG CCGAGGACTG A
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Protein sequence | MKASQAEILI VPGYTNSGPD HWQSRWEGKL STARRVEQAE WAKPVREDWV KRLVEEVNRA EKPVVLVGHS LGVPTIVHAV PHFQRKVAGA FLVAPPDVAN SAIRPRHLMT FGPYPRTPLP FPTLIVASRN DPFGTYDHAE DIAKAWGGLV VDAGEAGHLN AESGHGPWPE GTMVFAQFLS KLSAED
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