| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1897 |
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| Symbol | |
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| ID | 7387209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1573046 |
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| End bp | 1574470 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651171 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002549368 |
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| Protein GI | 222148411 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAACAC ATTGGCTCCC CGACCTTTCG ACAGCAGAGG GTCCGCTTTA TATCAGGATT
GCGGATCGGG CAGAGGCGGA TATCAAGACC GGCAGGTTGT CGTCCGGCGC AAAGCTGCCG
CCGCAGCGGG ATCTTGCCTT TGATTTGAAG GTAACAATCG GGACAATTAC CCGTGCCTAT
GCGCTATTGC GGGAACGTGG GCTGGTGACC GGTGAAGTCG GGCGCGGCAC TTACGTCCAG
TCAAGCCTGG CCGAGAGCGA AACCGATATT CATCGCGACC CGGTTACCCT CACCTATGGC
GGCACGCGAA CGCTGTCGCC GCCGCCGGGC AAGCTGCGTT TTGACACCAC CGCTGCCATC
GATGTCGGCC AGGCGGACAT TATCGGCCGT TTGATGACAG ATATTGCCCG CGATCAACCG
GACGAGATCG CCAGCTACAC CCGGACCCTG CTACCGGACT GGCTGGAAGC GGGCCGCCGC
TGGCTATCGA ATGGCGACTG GAGCCCAGAG GCTGCCAATA TCGTTCCACA GATGGGTGTA
CATGCCGGAG TGAATGCGGT GATCGCCGCG ATCAGCGGCA CCGGTGACCG GATCGTTTGC
GAACACCTGA CCTATTCACA GATTGCCCGT AGCGCCTCGC TGATGGGTCG CCAGATTGCG
TTGGTGGATT CAGACCATGA CGGCATCATG CCGGAGGACT TTGAACGGGT CTGCGCACGC
GAGCACCCAA AGGCAGCCTT CATCATGTCA TCGGGCCAAA ATCCGACGCT ATCCTGCCTG
CCCCTGTCAC GGCGGCTGGA GATCATCGAC ATCGCCCGCC GTTATAATGT CTGGCTGATC
GAGGATTACA TTTATGGAGC GCTGGTCGAC GATGGCATTC CCTTGCTGGC CCAACTGGCG
CCAGACAGGA CATTTCTGCT CAACAGCCTG TCTAAATCCG TGGCGGCCGG GGTGCGCGGC
GGCTGGGTCG CCTGCCCTGA CCATATGAGC CAGCGCGTCC GCGTCACCCA GAAAATGGTC
TGCGGCGGCC TGCCCTTCTT GCTGGCGGAA CTATCGGCGC GCCTGGTTCT GTCGGGGGCT
GCCGACGATA TTCGCGGGCG GGTGCTGGAA GAGCTTTCGG CTCGGGAACA GATTGTCCGG
CAGTTGTTCG AAGGTTACGA ATTCCGCTCG CATCCACGCC TGCCGTATTT CTGGCTGAAA
CTGCCGGAGC CATGGCTCTC TGGCACATTC AAGCAGGCCG CACTGGACCA GGGCGTGTTG
ATCGACGATG AGGATGAGTT CAAACCGGCC CGTTCATCGC GGGTCTTCCA CCATATCCGC
GCTGGCTTCA GCGAAGGGCG GGATCGAAGC ATCGCCGAAG GTGGCCTGAT CACGCTCAGA
CGGATTCTCG ACCAGATCCC GGTCGGCAGC AACGCCGTCA TGTAA
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| Protein sequence | MVTHWLPDLS TAEGPLYIRI ADRAEADIKT GRLSSGAKLP PQRDLAFDLK VTIGTITRAY
ALLRERGLVT GEVGRGTYVQ SSLAESETDI HRDPVTLTYG GTRTLSPPPG KLRFDTTAAI
DVGQADIIGR LMTDIARDQP DEIASYTRTL LPDWLEAGRR WLSNGDWSPE AANIVPQMGV
HAGVNAVIAA ISGTGDRIVC EHLTYSQIAR SASLMGRQIA LVDSDHDGIM PEDFERVCAR
EHPKAAFIMS SGQNPTLSCL PLSRRLEIID IARRYNVWLI EDYIYGALVD DGIPLLAQLA
PDRTFLLNSL SKSVAAGVRG GWVACPDHMS QRVRVTQKMV CGGLPFLLAE LSARLVLSGA
ADDIRGRVLE ELSAREQIVR QLFEGYEFRS HPRLPYFWLK LPEPWLSGTF KQAALDQGVL
IDDEDEFKPA RSSRVFHHIR AGFSEGRDRS IAEGGLITLR RILDQIPVGS NAVM
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