| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1853 |
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| Symbol | rplE |
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| ID | 7386814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1538495 |
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| End bp | 1539052 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651138 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_002549335 |
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| Protein GI | 222148378 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.282205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAGA CCAAGTATGA GCCACGGCTC AAGGCAGAAT ATGTAAGCCG CATTCGTCAG
GCGCTTCGGG AACAGTTTTC CTACGCCAAC GAAATGCAGA TCCCGAAGCT TGACAAGATC
GTCATCAACA TGGGCGTGGG CGAGGCAACT GCCGATTCCA AGAAGCCCAC GGTTGCTGCT
GCGGATCTGG CCGCGATTGC TGGTCAGAAG CCGGTCATCA CCCGGGCTCG TAACTCTATC
GCTGGCTTCA AGGTCCGCGA AGACATGCCG ATTGGCGCAA AGGTCACCCT GCGCGGCGCT
CGCATGTATG AGTTCATGGA CCGTCTGATC AACATCGCGC TTCCGCGCGT TCGCGACTTT
CGTGGTCTGA ACCCGAAGAG CTTTGACGGC CGTGGCAACT TCGCCATGGG CATCAAGGAA
CACATTGTGT TCCCAGAGAT CAACTACGAT AAGGTTGATC AGATGTGGGG CATGGACATC
ATCGTTTGCA CGACGGCTCC AACGGATGAC GAAGCACGGG CTCTTCTAAA AGAGTTCAAC
TTCCCCTTCC GTCAATAA
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| Protein sequence | MAETKYEPRL KAEYVSRIRQ ALREQFSYAN EMQIPKLDKI VINMGVGEAT ADSKKPTVAA
ADLAAIAGQK PVITRARNSI AGFKVREDMP IGAKVTLRGA RMYEFMDRLI NIALPRVRDF
RGLNPKSFDG RGNFAMGIKE HIVFPEINYD KVDQMWGMDI IVCTTAPTDD EARALLKEFN
FPFRQ
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