Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1770 |
Symbol | gatC |
ID | 7386755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1480080 |
End bp | 1480367 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643651075 |
Product | glutamyl-tRNA-Gln-amidotransferase chain C |
Protein accession | YP_002549276 |
Protein GI | 222148319 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.573795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTTG ATCTCGCCAC CGTCAAGCGT GTTGCCAAGC TTGCCCGTAT TGCTCTGCCC GAAGACGAGG CCGAGCGGGT CATGGGGGAG TTGAATGGCA TTCTTGGCTT TGTCGAACAA TTGTCGGAAG TGAATGTCGA TGGCGTCGAA CCGATGACGT CGGTCATGCC AATGGCTATG CGCAAGCGCA AGGACGCCGT CACCGATGGT GGTAAGGCCG ATGACATCGT TGCCAATGCG CCGGAAACCG ACCGCCATTT CTTCCTGGTG CCCAAGGTTG TCGAATAA
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Protein sequence | MSVDLATVKR VAKLARIALP EDEAERVMGE LNGILGFVEQ LSEVNVDGVE PMTSVMPMAM RKRKDAVTDG GKADDIVANA PETDRHFFLV PKVVE
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