Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1713 |
Symbol | nuoB |
ID | 7386711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1428281 |
End bp | 1428868 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643651031 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_002549232 |
Protein GI | 222148275 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAGTGA GCCAAAGCGA TCACCAGACC CTGGTTGCAC CACAGCCCAA GGGTATTCTG GACCCTGCCA CCGGCAAGCC GGTTGGCAAT GACAGCACTT TTTTCGGCGA GATCAATGAT GAACTGGCTG ACAAGGGGTT TCTGGTCACC TCAACCCAGG CTCTGATCAC CTGGGCGCGT ACCGGGTCAT TGATGTGGAT GCAGTTTGGT TTGGCCTGCT GCGCCGTCGA AGGCCTGATG CAGGCGTCCG GCCCGCGTTA CGACATGGAG CGCTTCGGCG TTGCACCGCG TGCATCTCCG CGCCAGTCGG ACGTGATGAT TGTTGCGGGA ACCCTGACCA ACAAGATGGC GCCCGCCTTG CGCAAGGTCT ATGACCAGAT GCCGGAGCCG CGCTATGTGA TCTCCATGGG TTCCTGTGCC AATGGCGGCG GCTACTATCA CTATTCCTAT TCCGTGGTCC GGGGTTGTGA CCGGGTCGTG CCTGTCGACA TTTATGTGCC GGGCTGTCCC CCCACGGCAG AGGCGCTGCT CTATGGCGTC CTGCTGCTTC AGAAGAAAAT CCGCCGCACC GGCACGATCG AGCGCTAA
|
Protein sequence | MGVSQSDHQT LVAPQPKGIL DPATGKPVGN DSTFFGEIND ELADKGFLVT STQALITWAR TGSLMWMQFG LACCAVEGLM QASGPRYDME RFGVAPRASP RQSDVMIVAG TLTNKMAPAL RKVYDQMPEP RYVISMGSCA NGGGYYHYSY SVVRGCDRVV PVDIYVPGCP PTAEALLYGV LLLQKKIRRT GTIER
|
| |