Gene Avi_1700 details

Gene Information

• Locus tag: Avi_1700
• Symbol: lon
• ID: 7386702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1416084
• End bp: 1418687
• Gene Length: 2604 bp
• Protein Length: 867 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643651019
• Product: ATP-dependent protease La
• Protein accession: YP_002549223
• Protein GI: 222148266
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0466] ATP-dependent Lon protease, bacterial type
• TIGRFAM ID: [TIGR00763] ATP-dependent protease La

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.311837
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCTGA GCCGGAATCA TGCAACAGGC CTCAAGCTGT TGCGCCACGG TGGTGGCACA 
GGGCACAAAG GCTTGAATTT TAGCTCTTGG GTCTCCACTT TAACCGGTGA GACAGGACCA 
TGTCCCCCGC GGCTTTTGAG CGCGGATTTG GGTCCCGGCA ACGGGACGAT GAAAGGAACT 
GGAATGACTA AAGTGACCTC TGTCACCGGC GAAACCAATA CCTATCCGGT ATTGCCGCTG 
CGTGACATCG TGGTGTTCCC GCACATGATC GTGCCGCTCT TCGTAGGGCG CGAGAAGTCT 
ATTCGTGCCC TCGAAGAAGT CATGGGCTCT GACAAGCAGA TCATGCTGGC CACCCAGATC 
AATGCAAGCG ATGACGATCC ATCGGCAGAT GCCATCTATG AGGTTGGCAC TGTCGCCAAT 
GTATTGCAGC TTTTGAAATT GCCTGACGGC ACCGTCAAGG TGCTGATCGA GGGCAAGGCG 
CGCGCCCGGA TCTCTGGCTA TACCGGACGT GAGGACTTCT ACGAGGCCCA TGCCGATCTG 
TTGCCCGAAC CCGCCGAAGA TCCGGTGGAA GTCGAGGCTC TGAGCCGGTC GGTGGTGTCG 
GAGTTTGAAA ATTACGTCAA GCTCAACAAG AAGATCTCGC CGGAAGTGGT GGGGGCTGCC 
AGTCAGATCG AAGACTATTC GAAGCTGGCC GATACGGTTG CCTCACATCT GTCGATCAAG 
ATCACCGAAA AGCAGGAAAT GCTGGAAACG GTGAGCATCA AGACCCGGCT TGAAAAAGCG 
CTCGGCTTCA TGGAGGGCGA AATTTCCGTT CTCCAGGTGG AGAAGCGTAT TCGCTCGCGC 
GTCAAGCGCC AGATGGAAAA GACCCAGCGC GAATATTACC TGAACGAGCA GATGAAGGCG 
ATTCAGAAGG AACTCGGCGA CGGCGAGGAA GGCCGCGACG AGATGGCCGA ACTGGAAGAG 
CGCATTGCCA AGACCAAGCT GTCCAAGGAA GCCAAGGACA AGGCTGATGC GGAGCTGAAA 
AAGCTCAAGC ATATGAGCCC GATGTCGGCG GAAGCCACAG TCGTGCGTAA CTACCTCGAC 
TGGCTGCTCG GCCTGCCCTG GAACAAGAAG TCCAAGGTGC GGATCGACCT CAACGCGGCT 
GAAAAAATCC TCGACGAGGA TCATTTCGGT CTCGATAAGG TCAAGGAACG GATCGTCGAA 
TATCTGGCTG TGCAGGCCCG TGCCACCAAG CTCAAGGGGC CAATCCTGTG CCTCGTCGGT 
CCTCCGGGCG TCGGCAAGAC CTCGCTCGCC CGCTCGATTG CCAAGGCCAC AGGACGTGAA 
TATGTCCGCA TGGCGCTGGG CGGCGTGCGT GATGAGGCCG AGATCCGCGG TCACCGCCGG 
ACCTACATTG GCTCCATGCC CGGCAAGGTC GTGCAGTCGA TGAAGAAGGC CAAACGGTCC 
AACCCGCTAT TCCTGCTCGA CGAAATCGAC AAGATGGGCC AGGATTTCCG TGGCGATCCG 
TCATCGGCTC TGCTTGAGGT GCTGGATCCG GAACAGAACG CGACCTTCAT GGACCATTAC 
CTGGAGGTCG AATACGATCT GTCCAACGTG ATGTTCATCA CGACAGCCAA TACGCTGAAT 
ATTCCCGGCC CGCTGATGGA CCGCATGGAA ATCATCCGTA TTGCCGGTTA CACCGAGGAC 
GAAAAGCTCC AGATTGCCAA GCGGCATCTT CTGCCAAAGG CGATCAAGGA ACATGCGCTG 
CGCCCGGAAG AGTTCTCGCT GGCGGATGAT GCGATTGTCT CGATCATCCA GCAATATACC 
CGCGAGGCAG GTGTGCGCAG TCTCGAGCGT GAATTGATGA AGGTCGCCCG CAAGGCTGTG 
ACCGAGATCA TCAAGGGCAA GTCGACCTCT GTGGCCGTCA CGGCGGCCAG CATCAACGAT 
TATCTCGGTG TGCCGCGCTA TCGTCATGGT GAGGCCGAAG GCGAGGATCA GGTTGGGATC 
GTCACCGGTC TTGCCTGGAC GGAAGTGGGC GGCGAATTGC TGACCATTGA AGGTGTGATG 
ATGCCGGGTA AGGGCCGCAT GACGGTGACC GGCAATCTGA AGGAAGTGAT GAAGGAATCG 
ATTTCGGCGG CGGCATCCTA TGTCCGCTCG CGCGCCGTCG ATTTCGGAAT TGAGCCTCCG 
CGCTTCGACA AGTCGGACAT TCACGTCCAC GTGCCGGAAG GTGCGACGCC TAAGGACGGT 
CCGTCGGCTG GCGTGGCAAT GGCAACCGCC ATTGTTTCGA TCATGACGGG CATTCCGGTC 
AACAAGGACG TAGCGATGAC AGGTGAGATC ACCCTGCGCG GTCGCGTCTT GCCGATTGGT 
GGCTTGAAGG AAAAGCTGCT GGCCGCTCTT CGCGGTGGCA TCAAGAAGGT TCTGATCCCG 
GAAGAAAACG CCAAGGATCT GGCGGATATT CCAGACAATG TGAAGAACAA TCTTGAGATC 
GTCCCGGTCG CCCGGATGGG TGAGGTGATT GCTCATGCGC TGGTGCGCAT ACCTGAGCCG 
ATCGAGTGGG ATGGCACGGT GGAAACGCCT GCCGTCGGCA CTGTTGAAGG TGTCGATGAT 
TCAGGCGCAA CCGTGGCGCA CTGA 

 

Protein sequence

MGLSRNHATG LKLLRHGGGT GHKGLNFSSW VSTLTGETGP CPPRLLSADL GPGNGTMKGT 
GMTKVTSVTG ETNTYPVLPL RDIVVFPHMI VPLFVGREKS IRALEEVMGS DKQIMLATQI 
NASDDDPSAD AIYEVGTVAN VLQLLKLPDG TVKVLIEGKA RARISGYTGR EDFYEAHADL 
LPEPAEDPVE VEALSRSVVS EFENYVKLNK KISPEVVGAA SQIEDYSKLA DTVASHLSIK 
ITEKQEMLET VSIKTRLEKA LGFMEGEISV LQVEKRIRSR VKRQMEKTQR EYYLNEQMKA 
IQKELGDGEE GRDEMAELEE RIAKTKLSKE AKDKADAELK KLKHMSPMSA EATVVRNYLD 
WLLGLPWNKK SKVRIDLNAA EKILDEDHFG LDKVKERIVE YLAVQARATK LKGPILCLVG 
PPGVGKTSLA RSIAKATGRE YVRMALGGVR DEAEIRGHRR TYIGSMPGKV VQSMKKAKRS 
NPLFLLDEID KMGQDFRGDP SSALLEVLDP EQNATFMDHY LEVEYDLSNV MFITTANTLN 
IPGPLMDRME IIRIAGYTED EKLQIAKRHL LPKAIKEHAL RPEEFSLADD AIVSIIQQYT 
REAGVRSLER ELMKVARKAV TEIIKGKSTS VAVTAASIND YLGVPRYRHG EAEGEDQVGI 
VTGLAWTEVG GELLTIEGVM MPGKGRMTVT GNLKEVMKES ISAAASYVRS RAVDFGIEPP 
RFDKSDIHVH VPEGATPKDG PSAGVAMATA IVSIMTGIPV NKDVAMTGEI TLRGRVLPIG 
GLKEKLLAAL RGGIKKVLIP EENAKDLADI PDNVKNNLEI VPVARMGEVI AHALVRIPEP 
IEWDGTVETP AVGTVEGVDD SGATVAH