| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1645 |
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| Symbol | |
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| ID | 7386664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1375343 |
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| End bp | 1376326 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650980 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002549185 |
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| Protein GI | 222148228 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATGC CAACCACTAT TTTGCGTCGG ATTGAAATCC TTGTCTTTCC GGATGCCCAG
GTGCTCGACG TGACAGGTCC CGCACAGGTC TTCGCGTCGG CCAATGAGAT GGCGCGCAGA
AGCGCCCACT CCGAAAAGGG ACCCCTCTAC GATATCGCCT TGGTCGCGGA AATGGCGGAG
GTGACCTGCA ATTCCGGGAT TGCGCTGCGG TGTGCTCTCC TTTCGGAAGA CCGACCGGCA
CCTGATACCG CCATCGCTGT CGGCGGCAGC GGGGTTAATG TCGCATGCAG CCGTCCGGTC
TTGATCGACT GGGTTCGTGA CCGCGCGATC CATGCCCGGC GTATGGCGTC GGTTTGCAGC
GGTGCGTTTC TACTGGCGGA GGCCGGCTTG CTGGATGGTC GCCGCGCCGT AACACATTGG
CATCGCTATG ACGAATTCGC TGGGCGGTTT CCGCAGGTTC GCCTCGAACG CGACCCGATC
TTTTTGCGAG ATGGTAAGAT CTGGACCTCG GCGGGCGTGA CGGCCGGGAT AGACCTCGCT
TTGGCGATGG TTGAAGAGGA TCACGGCCGC GCACTTGCGC TCGCCGTCGC CCGCGAATTG
GTGGTTTTTC TCAAGCGGCC TGGTGGCCAG TCGCAATTCA GCGCGCCGCT GAGACTCCAG
ACCTCGGACG ACAGGTTCGC CGATCTTCAC GCTTGGATCT CGGCCAATCT GACCCATTCG
CTGACGCTAC ATACGCTGGC GGATCGGGCG GGAATGAGCC TTCGATCTTT CGCCCGCCAT
TACCGGCAAC GGACGGGCCG TACACCCGCC GACGCGGTTG AGATCATCCG GCTGGAACGG
GCGCAAGGGC TACTGGAGAC CGGATTTTCC GTTGAAGCCG CCGCTCGCAA ATGCGGTTTC
GGCTCCCCGG AGACCATGCG GCGGGTGTTT CTGCGCAGGT TAGGCGTCGG GCCCAAGGAC
TGGCAGGAGC GGTTTCAAGA GTGA
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| Protein sequence | MLMPTTILRR IEILVFPDAQ VLDVTGPAQV FASANEMARR SAHSEKGPLY DIALVAEMAE
VTCNSGIALR CALLSEDRPA PDTAIAVGGS GVNVACSRPV LIDWVRDRAI HARRMASVCS
GAFLLAEAGL LDGRRAVTHW HRYDEFAGRF PQVRLERDPI FLRDGKIWTS AGVTAGIDLA
LAMVEEDHGR ALALAVAREL VVFLKRPGGQ SQFSAPLRLQ TSDDRFADLH AWISANLTHS
LTLHTLADRA GMSLRSFARH YRQRTGRTPA DAVEIIRLER AQGLLETGFS VEAAARKCGF
GSPETMRRVF LRRLGVGPKD WQERFQE
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