| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1642 |
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| Symbol | |
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| ID | 7386662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1373092 |
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| End bp | 1374018 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643650978 |
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| Product | AAA-family ATPase |
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| Protein accession | YP_002549183 |
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| Protein GI | 222148226 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.722719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGAT CAGGATCAAA ACCATCTGCG GGGTCGGAAA AGGCTTCTAC CTTAAAGCCG
CTTTTGGGCT CCAAATCTCG TATCGCCGGC GGCGATACTC TCCCTAGACA GGCGTTTTCT
CCGACAGGAA ATCTTTCTGG ACGTGCCGCT GAGTTCATGG AATTCGTTGA GCCGCAACGC
GACGTTAGGG AACTGGTGCT CTCGACCGAG GTTTCGCGGA CGCTGTACGA TATTGCAGAT
GAATATCGTC ACAGCGAGGC CATTCGAAGC CATGGCCTGC CGCTGCGGTC GCGGCTACTG
TTTTGCGGCC CGCCCGGCTG CGGTAAATCG CTCACCGCCG AGGTGCTCGC CAAGGAGCTC
GGGCTCCCAT TCATGGTAGC CAAGCTCGAT GCATTGATTG GCTCCATGCT TGGGGAGACA
GCATCGAATC TACGCCGCCT GTTTGATGCC GCTGAACGTC AGACTTCCAT TCTGTTCATC
GACGAATTTG ACGCCTTGGC CAGGACCAGA TCCGATCCAA CCGAGCATAA TGAAATGCGC
AGGGTCGTGA ATAATCTCTT GCTGATGATA GAACGATTTA AAGGTCGTGG TTTTATCGTT
GCGGCAACCA ACCTTGAGTC TACGGTTGAC CCTGCGATTA TACGACGATT TGATGAAGTC
GTTCTATTCG GGCGTCCGAA CGCGTCAGAC ATCCGTCGGC TGATCAAGTT CAAGACACGA
AATTTTGGCC TTGAATTCGA TATTGCTGTC GATGCAAAGC AATTTGTCGG AAGAAGTCAC
GCTGACGTTG AACGCATCTG TTATACCGCA ATGCGACACG CCATCATGCA GAGTCGCAAG
AAGATATCTC GACTAGACTT CGATTACGCG ATAAATTCAG ATCGACGTCG CAAAGATATT
CAGAGTAAGG TGAGCTCCTC TATTTGA
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| Protein sequence | MSRSGSKPSA GSEKASTLKP LLGSKSRIAG GDTLPRQAFS PTGNLSGRAA EFMEFVEPQR
DVRELVLSTE VSRTLYDIAD EYRHSEAIRS HGLPLRSRLL FCGPPGCGKS LTAEVLAKEL
GLPFMVAKLD ALIGSMLGET ASNLRRLFDA AERQTSILFI DEFDALARTR SDPTEHNEMR
RVVNNLLLMI ERFKGRGFIV AATNLESTVD PAIIRRFDEV VLFGRPNASD IRRLIKFKTR
NFGLEFDIAV DAKQFVGRSH ADVERICYTA MRHAIMQSRK KISRLDFDYA INSDRRRKDI
QSKVSSSI
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