| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1622 |
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| Symbol | hppA |
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| ID | 7387414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1357527 |
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| End bp | 1359665 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650963 |
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| Product | membrane-bound proton-translocating pyrophosphatase |
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| Protein accession | YP_002549168 |
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| Protein GI | 222148211 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3808] Inorganic pyrophosphatase |
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| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTC TGTTAGGCGT AATTCTATGT GGCTTGATTT CCGTGGCCTA TGCGGTCTGG
GCAACGCAGG CGGTGTTGGC TGCTGACCAG GGCACGCCGC GTATGCAGGA AATCGCGGGC
TATATCCGCG AAGGGGCGCA GGCCTATCTG GCTCGGCAAT ATCTGACCAT CGCTATCGTC
GGTGCCGTGG TGTTTGCAGG CGTTTGGTAC TTGCTGTCGG GAGAGGCTGC CATTGGCTTC
CTGATCGGCG CGGTTCTCTC AGGGGCCGCA GGCTTTATCG GCATGCATGT GTCGGTGCGC
GCCAATGTCC GCACCGCGCA GGCCTCGGCC CAGAGCTTGG CCGCCGGTCT CGACATTGCC
TTCAAATCCG GAGCTATTAC CGGCATGTTG GTGGCAGGTC TCGCCCTTCT CGGCGTCTCC
GTTTATTATT GCGTTCTGAC CTATGGCCTC GGCCATGCCA GCGGCTCGCG CGATGTGATC
GATGCGCTGG TGGCACTTGG CTTCGGCGCT TCGTTGATTT CAATTTTTGC ACGGCTTGGC
GGTGGCATCT TCACCAAGGG TGCCGATGTC GGCGGCGATC TCGTCGGTAA GGTCGAGGCG
GGTATTCCAG AAGATGATCC GCGCAACCCG GCCACCATTG CCGACAATGT CGGTGATAAT
GTCGGCGATT GCGCAGGCAT GGCCGCCGAC CTGTTTGAGA CCTATGCGGT CTCCGTGGTT
GCCACCATGG TGCTGGCGGC GATTTTCTTC GCAGGCAGCG CGATACTGGA AAGCGCCATG
ATCTATCCGC TGGCGATTTG CGGCACTTGC ATCCTGACCT CGATTGCCGG TACGTTTTTC
GTCAAGCTCG GCGTCAATGG CTCGATCATG GGCGCGCTCT ACAAAGGCCT GATCGTTACC
GGCCTACTCT CCATCATCGG TCTCGCCGTG GCCACCCAGA TCACCATCGG TTGGGGTGCG
ATTGGCAGCG TTGCGGGCCA AGCGATTACC GGCGTCAACC TGTTCATCTG CGGCATTCTC
GGCCTGGTCG TGACCGCGCT GATCGTTGTC ATCACCGAAT ACTATACCGG AACCAACAAA
CGCCCGGTCA ATTCCATCGC CCAGGCGTCG GTGACTGGTC ACGGCACCAA TGTCATCCAG
GGTCTGGCGG TTTCCCTTGA GTCAACCGCG CTGCCAGCGC TGGTGATCAT CGGCGGCATC
ATCTCCACCT ATCAGCTGGC CGGTCTGTTC GGCACCGCCA TCGCTGTCAC CACCATGTTG
GGGCTGGCGG GGATGATCGT CGCGCTCGAT GCTTTTGGTC CCGTCACCGA CAATGCCGGT
GGCATCGCCG AAATGGCCCA TCTGCCGCCG GAGGTGCGCA AGGTTACCGA CGCGCTGGAT
GCAGTCGGCA ATACGACCAA GGCCGTCACC AAGGGCTATG CCATCGGCTC AGCCGGGCTG
GGCGCGCTGG TGCTGTTTGC CGCCTATTCC AACGACCTGC AATATTTCGC GGCCAATGGT
GATCAATATC CCTATTTTGC CGGGATCGGC GACATTTCCT TCAGCCTCTC CAATCCTTAT
GTGGTGGCCG GGCTGATCTT CGGCGGTCTC ATTCCCTATC TTTTTGGCGG TATCGCCATG
ACGGCGGTGG GCCGGGCCGC TGGCTCCATC GTTGAGGAAG TGCGTCGCCA GTTCCGTGAC
AAGCCCGGCA TCATGCAGGG CACCGAGAAA CCGGATTATG GCCGCGCCGT GGATATTCTC
ACCAAGGCGG CAATCCGGGA GATGATCGTG CCGTCGTTAT TGCCGGTGCT GGCGCCCATT
GTCGTCTATT TCGGCGTGCT GCTGGTCTCC GGTTCCAAGG CCTCGGCCTT TGCAGCCCTG
GGTGCATCCT TGCTGGGCGT GATCGTCAAC GGATTGTTCG TGGCAATTTC CATGACATCG
GGCGGTGGCG CCTGGGATAA TGCCAAGAAG AGCTTTGAGG ACGGTTTTGT TGACAAGGAT
GGGACAACGC ATCTGAAAGG GTCAGACGCC CATAAGGCGT CCGTCACAGG CGATACGGTT
GGTGATCCCT ACAAGGATAC GGCAGGCCCG GCCGTCAATC CGGCCATCAA GATCACCAAT
ATCGTCGCCC TGTTGCTGCT GGCTATTCTT GCCGGTTGA
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| Protein sequence | MAVLLGVILC GLISVAYAVW ATQAVLAADQ GTPRMQEIAG YIREGAQAYL ARQYLTIAIV
GAVVFAGVWY LLSGEAAIGF LIGAVLSGAA GFIGMHVSVR ANVRTAQASA QSLAAGLDIA
FKSGAITGML VAGLALLGVS VYYCVLTYGL GHASGSRDVI DALVALGFGA SLISIFARLG
GGIFTKGADV GGDLVGKVEA GIPEDDPRNP ATIADNVGDN VGDCAGMAAD LFETYAVSVV
ATMVLAAIFF AGSAILESAM IYPLAICGTC ILTSIAGTFF VKLGVNGSIM GALYKGLIVT
GLLSIIGLAV ATQITIGWGA IGSVAGQAIT GVNLFICGIL GLVVTALIVV ITEYYTGTNK
RPVNSIAQAS VTGHGTNVIQ GLAVSLESTA LPALVIIGGI ISTYQLAGLF GTAIAVTTML
GLAGMIVALD AFGPVTDNAG GIAEMAHLPP EVRKVTDALD AVGNTTKAVT KGYAIGSAGL
GALVLFAAYS NDLQYFAANG DQYPYFAGIG DISFSLSNPY VVAGLIFGGL IPYLFGGIAM
TAVGRAAGSI VEEVRRQFRD KPGIMQGTEK PDYGRAVDIL TKAAIREMIV PSLLPVLAPI
VVYFGVLLVS GSKASAFAAL GASLLGVIVN GLFVAISMTS GGGAWDNAKK SFEDGFVDKD
GTTHLKGSDA HKASVTGDTV GDPYKDTAGP AVNPAIKITN IVALLLLAIL AG
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