| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1592 |
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| Symbol | aspS |
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| ID | 7387393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1332566 |
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| End bp | 1334371 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650942 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_002549147 |
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| Protein GI | 222148190 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0409967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGTT ATCGCAGCCA CACCTGTGCC GCTCTCCGCA AGTCCGATGT TGGTGCCACC
GTGCGCCTTT CCGGCTGGGT CCACCGCGTC CGCGACCACG GCGGCGTTCT CTTCATCGAC
CTTCGTGACC ATTATGGTAT CACGCAGGTG GTGGCCGATC CCGATAGCCC GGCTTTCAAG
CTGGCCGAGA CCGTGCGCGG CGAATGGGTG ATCCGCATCG ATGGCGTGGT CAAGGCCCGC
GCCGATGAGA CCGTCAACAA GGCCATGCAG ACCGGCGAAA TCGAGCTGTA TGCGCAGGAA
ATCGAAATTC TCGCCGTGGC CAAGGAATTG CCGCTGCCAG TGTTTGGCGA GCCGGACTAT
CCGGAAGATG TGCGCCTGAA GTATCGCTTC ATCGACCTTC GCCGCGAGAC TCTGCACAAG
AACATCGTCA AGCGCACCCA GATTATTTCA TCCATGCGCA ACGGCATGAG TGAGCTTGGC
TTTGCCGAAT ACACCACGCC CATCCTGACC GCCTCTTCGC CCGAAGGTGC GCGCGACTTT
TTGGTGCCAA GCCGTATCCA CGAAGGCCAG TTCTTCGCCC TGCCGCAGGC TCCGCAGCAG
TATAAGCAGC TGTTGATGGT GGCTGGTTTC GACCGCTACT TCCAGATTGC GCCCTGCTTC
CGCGATGAAG ACCCGCGCGC TGACCGTCTG CCCGGCGAGT TCTACCAGCT CGACGTGGAA
ATGAGCTTCG TGACCCAGGA AGATGTCTGG ACCACGATGG AACCGATGAT GACCAAGGTG
TTCGAGCAGT TTGCCGAAGG CAAGCCTGTG ACGAAGCAAT GGCCACGCAT TCCCTATGAT
GAAGCGATCC GCAAATACGG CTCCGATAAG CCCGATCTGC GTAACCCGAT TGTTATGCAG
GCCGTGACCG AGCATTTCGC TGATTCAGGC TTCAAGATTT TCGCAAGCAT GATTGCCGCC
AACCCGAAGG TTGAGGTCTG GGCGATCCCG GTCAAGCACA CGGAAGCAAC CGGCGCGATT
GGCCGCGCCG TTTGCGACCG CATGAATGCC TGGGCGCAGT CCACCGGCCA GCCGGGCCTT
GGCTATATCT TCTGGAAGGA AGAAGACGGC AAGGTTGCCG GTTCCGGCCC CTTGGCCAAG
AACATTGGCG AAGAGCGCAC CGCCGCCATT GCCGCCCAGC TCGGCCTTGG CGCTGGCGAT
GCCTGCTTCT TCGTCGCCGG TGATCCGGCC AAGTTCTATA AGTTCGCTGG CGAAGCCCGC
ACCCGTGCAG GTGAAGAGCT GAACCTTATT GACCGCGACC GGTTTGAAAT GTGCTGGATT
GTGGACTTCC CGTTCTACGA ATGGAGCGAG GAAGAAAAGA AGATCGACTT CGCCCACAAC
CCGTTCTCCA TGCCGCAGGG CGGGTTGGAA GCCTTCGACA GCCAAGACCC GCTGACACTC
AAGGCTTACC AATATGACGC CGTCTGCAAC GGCTTTGAAA TCGCTTCCGG CTCGATCCGT
AACCAGTCGC CAGAACTGAT GGTCAAGGCG TTCGAGAAGG TTGGTCTCAG CCAGACGGAC
GTGGAAGAAC GCTTCGGCGG CCTCTACCGC GCCTTCCAAT ACGGCGCACC GCCGCATGGC
GGCTGCGCAT TCGGTATCGA CCGCGTGGTC ATGCTGCTGG TGGGCGCCAA GAACCTGCGC
GAAATCTCGC TGTTCCCGAT GAACCAGCAG GCGCAGGATC TGTTGATGGG GGCACCGGCT
CCGGCAACCC CAACCCAGCT GCGCGAATTG GCGCTGCGGG TGGTGCCAAC GCCGAAGAAA
GACTGA
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| Protein sequence | MHRYRSHTCA ALRKSDVGAT VRLSGWVHRV RDHGGVLFID LRDHYGITQV VADPDSPAFK
LAETVRGEWV IRIDGVVKAR ADETVNKAMQ TGEIELYAQE IEILAVAKEL PLPVFGEPDY
PEDVRLKYRF IDLRRETLHK NIVKRTQIIS SMRNGMSELG FAEYTTPILT ASSPEGARDF
LVPSRIHEGQ FFALPQAPQQ YKQLLMVAGF DRYFQIAPCF RDEDPRADRL PGEFYQLDVE
MSFVTQEDVW TTMEPMMTKV FEQFAEGKPV TKQWPRIPYD EAIRKYGSDK PDLRNPIVMQ
AVTEHFADSG FKIFASMIAA NPKVEVWAIP VKHTEATGAI GRAVCDRMNA WAQSTGQPGL
GYIFWKEEDG KVAGSGPLAK NIGEERTAAI AAQLGLGAGD ACFFVAGDPA KFYKFAGEAR
TRAGEELNLI DRDRFEMCWI VDFPFYEWSE EEKKIDFAHN PFSMPQGGLE AFDSQDPLTL
KAYQYDAVCN GFEIASGSIR NQSPELMVKA FEKVGLSQTD VEERFGGLYR AFQYGAPPHG
GCAFGIDRVV MLLVGAKNLR EISLFPMNQQ AQDLLMGAPA PATPTQLREL ALRVVPTPKK
D
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