Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1577 |
Symbol | |
ID | 7387381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1317612 |
End bp | 1318751 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650930 |
Product | permease |
Protein accession | YP_002549135 |
Protein GI | 222148178 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC GCGTCAGCGG CCCCGTTTTC TGGCGGCAGG TTCTTTTCGG CATCGGCACG CTGGCGGTGG TCATCGCCTT TTTGCTGACC TTCAGCTCCA TTCTGCTGCC GTTTGTGGCT GGCATGGCGC TCGCCTATTT TCTCGATCCG GTCGCCGACC GGCTGGAGCG GCTGGGCCTG TCGCGGATGA TGGCGACAGT GTTGATCCTG GTGTCCTTCG TGGTGATTTT CGTCTTGTCG CTGGTGATCA TCATTCCGGT CCTCGTTACC CAGCTCAACG ACTTCATCAC CAATATCCCT GATTATGTCA GCCAGTTGCA GGCGCTGATT GCCAAATCCA ACGCCTCCTG GGTACCGAAA TGGCTGAATG GCCAGGTGAG CACCCAGATG GCGGCGATCA AGGGCAATTT TTCCCGCTAT CTGGCGGAAG GGGCAGGCTT TATCGGCACG CTTCTGTCGC AATTGTGGAA TTCCGGCAAG GCGCTGCTTG ATATCATCTC CCTGTTGGTG GTGACCCCGG TCGTCGCCTT CTATCTTCTG CTCGACTGGG ACCGGATGAT GGCCAAGTTG GACAGCCTCA TTCCGCGCAA TCAGGTTGGC GCCGTGCGGG AAATCGCCCG TGAAATGAAC CGGACCATTG CCGGTTTCGT GCGTGGCCAG GGCTCGCTCT GCCTCATCCT CGGCATTTAC TACGCGGTCG GCCTGTCGCT GATCGGTTTG AATTTTGGCC TGCTGATCGG CTTTTTCACC GGCATGATCA GCTTCATTCC CTATGTCGGC TCATCCGTTG GGCTGGTTCT GGCGCTGGGC ATGGCGGCGG TGCAGTTCTG GCCGGACTAT CTCTGGGTGG TCATAACGGG CGTATTCTTC TTCACTGGCC AGTTTCTGGA AGGCAATGTC CTTCAGCCCA AGCTGGTCGG CTCCAGCGTC GGTCTGCATC CCGTCTGGCT GATGTTTGCG ATGTTCGCCT TCGGCTCGCT CTTCGGTTTT CTCGGGGTTC TGGTTGCCGT TCCCTGCGCG GCGGCAGTTG GCGTGCTTGT TCGCTTTGCC GTGCGGCGGT ATCTTGACAG CGATCTATAC TATGGTGAGG AGGCGACCGT GATCAAGGAC GTCCGCCCTC CCGTCATTTC AGAGACGTAA
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Protein sequence | MIKRVSGPVF WRQVLFGIGT LAVVIAFLLT FSSILLPFVA GMALAYFLDP VADRLERLGL SRMMATVLIL VSFVVIFVLS LVIIIPVLVT QLNDFITNIP DYVSQLQALI AKSNASWVPK WLNGQVSTQM AAIKGNFSRY LAEGAGFIGT LLSQLWNSGK ALLDIISLLV VTPVVAFYLL LDWDRMMAKL DSLIPRNQVG AVREIAREMN RTIAGFVRGQ GSLCLILGIY YAVGLSLIGL NFGLLIGFFT GMISFIPYVG SSVGLVLALG MAAVQFWPDY LWVVITGVFF FTGQFLEGNV LQPKLVGSSV GLHPVWLMFA MFAFGSLFGF LGVLVAVPCA AAVGVLVRFA VRRYLDSDLY YGEEATVIKD VRPPVISET
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