| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1575 |
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| Symbol | garS |
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| ID | 7387380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1316268 |
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| End bp | 1317341 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650929 |
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| Product | phosphoribosylaminoimidazole synthetase |
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| Protein accession | YP_002549134 |
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| Protein GI | 222148177 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
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| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0602747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT CGGGGAAAAA CGGTCTGACC TATAGCGATG CAGGCGTCGA TATCGATGCG
GGCAATCTTC TGGTCGAAAA GATCAAGCCT GCGGTTCGCT CCACCCGCCG CCCCGGCGCC
GATGGCGAGA TTGGCGGCTT CGGCGGATTG TTCGACCTGA AAGCGGCAGG CTTTACCGAT
CCGATTTTGG TGGCGGCCAA TGACGGCGTC GGCACCAAGC TGAAGATTGC CATTGATGCA
GGCCTGCATG ACACTGTCGG CATCGACCTC GTCGCCATGT GCGTCAACGA TCTCGTGGTG
CAGGGTGCCG AACCCCTGCT GTTTCTCGAT TATTACGCCA CCGGCAAGCT CGATCCCAAC
CAGGGTGCGG CCATTGTTGG CGGCATTGCG GCGGGCTGCC GCGAGGCAGG CTGCGCGCTG
ATCGGCGGCG AGACCGCTGA AATGCCCGGC ATGTATTCCG GCGGCGATTA CGATCTGGCC
GGTTTTGCGG TCGGTGCCGC CGAGCGCGGA CAGCTTCTGC CCGCTGGCGA TATTGCCGAG
GGCGATGTCA TTCTGGGTCT TGCCTCATCC GGCGTCCATT CCAACGGCTT TTCGCTGGTG
CGCAAGATCG TCGAGCTTGC CGGCCTTGGC TGGGACGCAC CGGCACCGTT TGCAGAAGGT
GCTACGCTTG GCGCGGCTCT GCTGACCCCG ACCCGGATCT ATGTGAAGCC GCTGTTGAAG
GCGATCCGCG AGACCAAGGC CTTGAAGGCG CTGGCCCATA TTACCGGCGG TGGTTTTCCG
GAAAATATTC CGCGCGTATT GCCAAAGCAT CTGGCCGCCG AAATCGACCT CGCGTCGATC
ACGGTTCCCA CCGTGTTTTC GTGGCTGTCG AAAACCGGTG GCGTGGCGCA GAATGAAATG
CTGCGCACTT TCAATTGCGG CGTCGGCATG ATTGTCGTGG TCGCTGCCGA AAACGCCGAT
GCGGTTGCTG CGGCTCTGGA AGCCGAAGGC GAAACCGTCG CCCGTCTCGG CCGGATGATT
TCCCGTGAGG AAGGCGCGCC CGGTACCGTC TACAAGGGAA CGCTCGGCCT ATGA
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| Protein sequence | MSKSGKNGLT YSDAGVDIDA GNLLVEKIKP AVRSTRRPGA DGEIGGFGGL FDLKAAGFTD
PILVAANDGV GTKLKIAIDA GLHDTVGIDL VAMCVNDLVV QGAEPLLFLD YYATGKLDPN
QGAAIVGGIA AGCREAGCAL IGGETAEMPG MYSGGDYDLA GFAVGAAERG QLLPAGDIAE
GDVILGLASS GVHSNGFSLV RKIVELAGLG WDAPAPFAEG ATLGAALLTP TRIYVKPLLK
AIRETKALKA LAHITGGGFP ENIPRVLPKH LAAEIDLASI TVPTVFSWLS KTGGVAQNEM
LRTFNCGVGM IVVVAAENAD AVAAALEAEG ETVARLGRMI SREEGAPGTV YKGTLGL
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