Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1565 |
Symbol | |
ID | 7387372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1309510 |
End bp | 1311624 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650921 |
Product | reductase |
Protein accession | YP_002549126 |
Protein GI | 222148169 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCA TCAGCCCCGT CTTGAAAACT TCCATTGGTC ATACGGCCTG TCCGCATGAC TGTCCATCCA CCTGCGCGCT TGAGGTTGAT CTGACCCCGG ACGGCAGGAT CGGACGGATG CGCGGCGCGC GCGACAATAG CTATACCGCA GGCGTGATCT GCGCCAAGGT GGCGCGCTAT ACAGAGCGGC TCTATCACCC CGACCGCTTG CTTGTGCCGC AGCGCCGGAA AGGCGCAAAA GGGGCGGGCA GCTGGCAGGA AATATCCTGG GATGCGGCGC TGGACGAGAT CGCCGATGCG TTCGTCAAAG CAGAGCAGGT GCATGGCAGC GAGGCCGTCT GGCCCTATTT CTATGCCGGA ACGATGGGGC AGGTGCAGCG CGATTCGATA GAGCGGCTGC GCCACGCCAA GAAATATTCC GGCTTTTTCG GCTCGATCTG CACCAATCTG GCCTGGACTG GCTATGTGAT GGGCACCGGC ACGCTGCGCG GCCCGGACCC GCGCGAAATG GCGGTTGCCG ATTGCGTGGT GATCTGGGGC ACCAATGCGG TGGCGACGCA GGTCAATGTC ATGACCCATG CGGTGGCGGC CCGCAAAAAT CGCGGCGCGA AAATCGTCGT TGTCGATATC TATGATAATC CGACCATGAA ACAGGCCGAT ATGGGCCTCA TTCTGCGTCC TGGCACCGAT GCGGCGCTAG CCTGTGCCGC CATGCATATC GCCTTTCGTG ATGGTTATGC CGACCGGGAG TATATGGCTG ACTTTGCCGA TGATCCCGCC GGGCTGGAAG CGCATCTGAA GGACAAGACC CCGGAATGGG CCGCCAGCGT CACCGGTCTT TCAATTGAAG AGATCGAAGG CTTCGCCAAA TTGGTCGGTG AGACCAAAAA GACATTCTTC CGCCTCGGCT ATGGTTTTAC CCGCAGCCGT AACGGTGCGG TTTCCATGCA TGCCGCCCTG TCGCTTTCGA CCGTGCTGGG CAGCTGGAAA TATGAGGGTG GGGGCGCGTT TCATTCCAAC AGCGATATTT TCAAGCTCAA CAAAGCCGAG TTGATGGGGA CGGCGTTTGT CGATCCTGAC ATTCGCATGT TGGACCAGTC GCAGGTTGGC CGGGTGCTGA CCGGCGACGC AGAATCGCTG CGCCATCGTG GTCCGGTGAC GGCGATGCTG ATCCAGAACA CCAACCCGGT CAATGTTGCG CCGGAACAGC GGCTGGTAAA GCAGGGTTTT CTGCGCGACG ATCTGTTTGT TGCCGTGCAT GAGCATTTCA TGACCGAGAC GGCGGAGCTT GCAGATATCG TGCTGCCAGC GACGATGTTT GTTGAGCATG ACGATCTCTA TCGCGGCGGT GGCCAGAGCC ATATGCTGAT TGGCCCTAAA CTGGTCGAGC CGCCGGAAAC GGTGCGCACC AATCTCTTCG TCATTGAGGA ACTGGCCAAA CGGCTCGGCG TGTCGGATCT TCCGGGGTTC GGCCTTAGCG AGCGCGAGCA TATCGACCAT ATCCTCGCCG CCAGCGGCAA GCCGGATTTT GCCAGTTTCG AGCAGGATAA GTGGCTGGAT TGCCAGCCGC CGTTCGAAGA CGCTCATTAT CTAAAAGGCT TTGCCCATCC CGATGGGAAA TTCCGCTTCA GGCCGGATTG GGAAGGCACG CCCGCGCCCA ACAAACCGCC ACGAGCGCTG GGGTCTCTGG GGCCGGTGGC CGCGCTTCCG GTTTTCCCCG ATCAGATGGA TGTGATCGAG ACAGCCGATA GCGAGCATCC GTTCCGGCTG GCAACGTCAC CCGCCCGCAA TTTTCTCAAC TCGACATTCG CCGAGACCAA GACCTCACGC GATAAGGAAG GCAGGCCGGA GGTGATGGTC AATCCGGCTG ACGCGGCAGA GCTAGGTATC GGCCATGGTG ATGTGGTGCG GATCGGCAAC CGGCGCGGCG CCTTGCGTAT CCATGTCAAC ATCACCGATG CGGTCAAGCC CGGCGTGCTG GTGGCAGAAG GTCTTTGGCC CAACAAGGCA CATCTGGACG GCGAGGGCAT CAACGTGCTG ACCGGTGCCG ACGCTCCGGC CCCGCATGGC GGTGCTGCGT TTCACGATAA CAAGGTTTGG GTGCGGGTAT CATGA
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Protein sequence | MNIISPVLKT SIGHTACPHD CPSTCALEVD LTPDGRIGRM RGARDNSYTA GVICAKVARY TERLYHPDRL LVPQRRKGAK GAGSWQEISW DAALDEIADA FVKAEQVHGS EAVWPYFYAG TMGQVQRDSI ERLRHAKKYS GFFGSICTNL AWTGYVMGTG TLRGPDPREM AVADCVVIWG TNAVATQVNV MTHAVAARKN RGAKIVVVDI YDNPTMKQAD MGLILRPGTD AALACAAMHI AFRDGYADRE YMADFADDPA GLEAHLKDKT PEWAASVTGL SIEEIEGFAK LVGETKKTFF RLGYGFTRSR NGAVSMHAAL SLSTVLGSWK YEGGGAFHSN SDIFKLNKAE LMGTAFVDPD IRMLDQSQVG RVLTGDAESL RHRGPVTAML IQNTNPVNVA PEQRLVKQGF LRDDLFVAVH EHFMTETAEL ADIVLPATMF VEHDDLYRGG GQSHMLIGPK LVEPPETVRT NLFVIEELAK RLGVSDLPGF GLSEREHIDH ILAASGKPDF ASFEQDKWLD CQPPFEDAHY LKGFAHPDGK FRFRPDWEGT PAPNKPPRAL GSLGPVAALP VFPDQMDVIE TADSEHPFRL ATSPARNFLN STFAETKTSR DKEGRPEVMV NPADAAELGI GHGDVVRIGN RRGALRIHVN ITDAVKPGVL VAEGLWPNKA HLDGEGINVL TGADAPAPHG GAAFHDNKVW VRVS
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