Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1556 |
Symbol | pgsA |
ID | 7387366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1303264 |
End bp | 1303854 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650915 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_002549120 |
Protein GI | 222148163 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.361199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCGC GTACCTACAG CATCCCCAAC CTGTTGACAT ATGGCCGTAT TCTGGCCGTG CCTTTGATTG TTCTGTGCTT CTATCTGGAA GGCAAGCTGC AAAGCACCGA CTTTGCCCGC TGGGCGGCGC TGGCGATTTT CGTTGTCGCC TCGATTACCG ATTTCTTCGA TGGCTATCTG GCCCGGATCT GGAACCAGAC CTCCAATATC GGCCGGATGC TGGACCCGAT TGCCGACAAG CTGCTGGTCG CCACCTGCCT GTTGCTGATG GCCGCCGATA CAGAAAAAAC CATTGCCGGC TGGTCGCTCT GGGCCGCCAT CATCATCCTC TGCCGCGAAA TTCTGGTCTC CGGCCTGCGG GAATATCTGG CCGAGTTGAA GGTCAGCGTG CCTGTGACGC GAATCGCCAA GTGGAAAACC ACGGTGCAGA TGGTGGCGCT GGCCTTTCTG CTGGCCGGCC CGGCAGGCGA CAAGGTTCTG CCCTACACCA CCCAGATCGG CATCGGCCTG CTGTGGATCG CCGCCGCCCT GACCATGTAT ACCGGCTATG ACTATTTCAA AGCCGGTGTG AAACATATGG TGGACGAATG A
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Protein sequence | MASRTYSIPN LLTYGRILAV PLIVLCFYLE GKLQSTDFAR WAALAIFVVA SITDFFDGYL ARIWNQTSNI GRMLDPIADK LLVATCLLLM AADTEKTIAG WSLWAAIIIL CREILVSGLR EYLAELKVSV PVTRIAKWKT TVQMVALAFL LAGPAGDKVL PYTTQIGIGL LWIAAALTMY TGYDYFKAGV KHMVDE
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