| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1509 |
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| Symbol | |
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| ID | 7386472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1265738 |
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| End bp | 1266592 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650880 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002549085 |
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| Protein GI | 222148128 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATGC TTTCATCTCG TCCTGCTATT TCATCTCAAC CTCTCATTCG TGAGCAGACC
CGCTTCTGGC GAGATGCTCG GTTTGGCGGC ATGAAATGTA TGAGTGCGAC CTTTATCACC
CATCGGTTTT CCCCGCATGC CCATGAGCAT TTTGGCATCG GTGCCATGGA GACGGGGCAG
AAAATCGCCA CGATCAGGGG ATGCAGACAA GTCTGCGGAC CGGGCGATCT ATACCTGATC
AATCCGGAGG AGATCCACGA TGGCAGTCCT GCGGGTGGGG TCTATCGATA TCGGATGATC
TATCCGTCGG TCGCCATGGT GTGCGACGTT CTGCAAGAGA CCAGCAAGAG ACCGTCGTGG
GAAACGCCGT CCTTTCGCCA GCAGATCGTC ACGGATCCGG CCTTGGCGCA GGCCTTTAAC
CGGATGCACA GGCAAATAGA GCAGGCAGAT GGAATGCTCG GTGCCGAAGA GGGGATGCTG
GACATGCTCA CCGCTCTTTT CACCCGCCAT GGCGCTGTTG CGCCTGCCTC CTCTGCCGCT
CGCCCCGACA CGGCGATGGC GAGGGTGCGA GACTATCTCC ATGCGAATTT TGCTGAGGAT
ATCGGCCTTG ACCATCTGGC GGGGCTGGTC GGATTCAGCC GTGCGCATTT GATCCGCAGC
TTTCGCGCCA CCTATCATAT TACGCCCCAC GCCTATCTGA CACTTCGGCG TATTCGAGAA
GCGGAGTCCA TGCTGGCCAA GGACGCTGCG CCTGCCGACG TCGCCTTTGC CTGCGGCTTT
GCCGATCAGG CGCATTTTAC CCGCAATTTC AAGGCGCGGA TGGGCATGAC CCCGGCGCAA
TTTCGCCGGG GATAG
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| Protein sequence | MHMLSSRPAI SSQPLIREQT RFWRDARFGG MKCMSATFIT HRFSPHAHEH FGIGAMETGQ
KIATIRGCRQ VCGPGDLYLI NPEEIHDGSP AGGVYRYRMI YPSVAMVCDV LQETSKRPSW
ETPSFRQQIV TDPALAQAFN RMHRQIEQAD GMLGAEEGML DMLTALFTRH GAVAPASSAA
RPDTAMARVR DYLHANFAED IGLDHLAGLV GFSRAHLIRS FRATYHITPH AYLTLRRIRE
AESMLAKDAA PADVAFACGF ADQAHFTRNF KARMGMTPAQ FRRG
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