| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1507 |
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| Symbol | radA |
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| ID | 7386470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1262960 |
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| End bp | 1264360 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650878 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_002549083 |
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| Protein GI | 222148126 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA
[TIGR02012] protein RecA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGG CCAAAACCCA ATTCATCTGC CAGAACTGCG GCACGGTTCA CAGCCGCTGG
GCTGGCAAAT GCGATGGTTG CGCACAGTGG AACACCATTG TCGAGGAAGA TCCGATGGGT
GGCATCGGCT CTGGTCCCGG CAAGGTGCCG AAGAAAGGCC GGGCGGTAAC GCTGACCTCG
CTGTCGGGCG AAATCGAGGA AGCACCACGC ATTCCCACGG GCCTGTCGGA ACTGGACCGG
GCGACCGGCG GCGGTTTCGT GCGCGGCTCC GCCGTGCTGA TCGGCGGCGA TCCGGGCATC
GGTAAATCCA CCCTGCTAAT GCAGGCCGCC GCCGCCTTGT CGCGGCAGGG CCATCGGGTC
GTCTATGTCT CGGGCGAAGA AGCAGTGGCT CAGGTGCGGC TGCGCGCCCA GCGGCTGAAC
GCCGCCGATA CCGATGTGCT GCTGGCAGCA GAAACCAATG TCGAGGACAT TCTGGCGACA
ATTTCCGAAG GCAAACGGCC CGATCTTGTC ATCATCGATT CGATCCAGAC TCTCTGGAGT
GATACCGCCG ATTCGGCCCC CGGCACGGTC ACGCAGGTGC GCACCGGCGT GCAGGCGATG
ATTCGTTTCG CCAAGCAGAC TGGCGCCACC ATGGTGCTGG TCGGCCACGT CACCAAGGAA
GGCCAGATCG CCGGTCCCCG CGTCGTCGAG CACATGGTCG ATGCCGTGCT GTATTTCGAA
GGCGACCGGG GCCACCATTA CCGCATCCTG CGCACCGTCA AGAACCGTTT CGGACCCACC
GACGAAATCG GCGTGTTCGA AATGTCGGAC CGGGGGCTGC GCGAAGTCGC CAATCCATCG
GAACTGTTTC TGGGCGAGCG CAATGAAAAA GCGCCGGGCG CTGCGGTGTT TGCTGGCATG
GAAGGCACGC GGCCCGTGCT GGTCGAAGTA CAGGCTCTCG TGGCCGCGAC AGCACTTGGC
ACGCCGCGCA GGGCCGTGGT CGGCTGGGAT TCCAGCCGCC TGGCGATGAT TCTGGCCGTA
CTGGAGGCCC ATTGCGGCGT CAGGCTTGGC CAGCACGATG TCTATCTGAA TGTGGCAGGC
GGCTACCGAA TCACAGAACC CGCCGCGGAC ATGGCAATTG CCTCAGCGCT GGTCTCATCG
CTGGCTGGCG TCGCCCTGCC TGCCGATTGC GTTTATTTTG GCGAAATCAG CCTTTCGGGT
GCAGTGCGAC CGGTATCGCA TACGGCGCAG CGGTTGAAGG AGGCCGAAAA GCTTGGCTTT
TCCTCCGCCG TTTTGCCCGC CTCCTCCGTC GATCTGCCGA AGCGCACCGG CAAATGGGGC
GAAATTGAAA GCCTGCCGGA TCTGGTGGCG CGCATTGCCG GATCGAAACT GAAATCACGC
CAGCAGGGCA ATGAGGATTG A
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| Protein sequence | MAKAKTQFIC QNCGTVHSRW AGKCDGCAQW NTIVEEDPMG GIGSGPGKVP KKGRAVTLTS
LSGEIEEAPR IPTGLSELDR ATGGGFVRGS AVLIGGDPGI GKSTLLMQAA AALSRQGHRV
VYVSGEEAVA QVRLRAQRLN AADTDVLLAA ETNVEDILAT ISEGKRPDLV IIDSIQTLWS
DTADSAPGTV TQVRTGVQAM IRFAKQTGAT MVLVGHVTKE GQIAGPRVVE HMVDAVLYFE
GDRGHHYRIL RTVKNRFGPT DEIGVFEMSD RGLREVANPS ELFLGERNEK APGAAVFAGM
EGTRPVLVEV QALVAATALG TPRRAVVGWD SSRLAMILAV LEAHCGVRLG QHDVYLNVAG
GYRITEPAAD MAIASALVSS LAGVALPADC VYFGEISLSG AVRPVSHTAQ RLKEAEKLGF
SSAVLPASSV DLPKRTGKWG EIESLPDLVA RIAGSKLKSR QQGNED
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