Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1495 |
Symbol | |
ID | 7386462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1253108 |
End bp | 1255006 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650870 |
Product | glycosyltransferase protein |
Protein accession | YP_002549075 |
Protein GI | 222148118 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.403758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGCGCAGG TATGCGCCGC ACAGGGTCCG GCTGCCCGCC GTCTGGCCGA TAAGCCGGTG ATGATTTCAG TCCATGATCC CGATGGCTGC CTTGGGCCTT CGCCGCGTCT CTTGCTTCAT CGTCCCGGTC GGGTTCCAGC CATTCTCAAG CGTTCGCTTA TCGTGAAAAA CTCTGGCCGC TTCCTGGGAT GGATGCCCGA CGATCTGGAC TCGATTGCCG TCGTCGCGAC ACCGGCAAAG GACCGGGTCA ACGCAGTTCG GCAACCGACC GTCACGATCC GCACGCTGTC CATCGCCGAA GCTGTCCTGC GGGTGCTGAT CCGCTGGCCC CATACCGCAC GCACCTTGCT CCGCTTGCTG GCGGCGCGAA ACGTCAAGGG TGCGACGTTC CGGTTCCTCC GGCATTTCGA GGCCTTATCG TCACCCCGCT ATCAGGATTG GCTTCGGCTG CGCGATGAGG TGGACAGGCC ACCAGCCATT TCTAGCAGCT CGGCGCCTCT CGTTTTGGTC AGTGTTATGG GAGCGGGTGA GCGGCGGTCC GTCACGCGCA AAAGCCTTGA TCGGCAGACT TATCGGCAAG TTGAATTTGT CGATCTGGAA GACCTGGCCG GTGACCTGGC AAGCCGCGCG ACAGAGAAGG ATCTGTTCTG GCTGCTGGTG CCGGCCGGCG TCACCTTGTC GCCATTGGCG CTGCAATGGA TGGCGGATTG CCTGATCTGT CACCCGCAGG CGGCGGGGGT TTATTGCGAC GAGGACCAGA CTACCCGCAA GGGTGAGCCA GCTGTGCCGT TGTTCAAACC AGCCTGGAAC CTGCCCTTGG TGCAAACCGG CTGGCTGCCG ATGGACTGCG TTCTCTTGCG TCCTGCCTGC CTACCGCAAC CTGTCGATGT CACCAGTTTC GATGCGAACC AACTCGTCAT CCAGGCAGCA GCAGCGGGGG ACATTCTTCA TCTGCCCCGC GTTCTGGCTC ACCGATCCTC TCCGCGACCG GCTCTCACGC TATCGCGGCC CTTGCTGCGA CCGGGCAGCT CTCGCCCGCC TGTCACCGTG ATCATTCCAA CCCGGGACCG GGCGGATCTT CTTTCAGCCT GTCTTGATGG CCTGCTGGGT CGCACCGATC ATGGCGAATT GGATATTATC GTCATCGACA ATGACAGCAA GGAGGATGCG ACGCGCATAC TTCTCGACAG GATCGAGGCG GAAGGCCATG TGCGGCGCTT GCCGATGCCC GGCACCTTCA ATTTTTCCAG AGCCTGCAAT CTCGGCGTCG ATCAGGCCCG GCATGACCGG ATTCTGCTGC TCAACAACGA TGTCGAACCG CTGGAGCGCG ACTGGCTGGG CGAGATGAAT GCCGAGTTGG ATGATCCCCA AGTCGGGGCT GTCGGTGCCC TGTTGCTCTA TCCCGATGGT TTTGTCCAGC ATGCCGGTGT CACGCTGGGG GCGGGGTCCA TTGCCCGCCA CAGTTTCCAT TTTCATGATC CTGACGGTGG CGAGGATCAT GGCCTGCTTG CGCAGCGCCG CCATGTTTCC GCCGTCACGG CGGCCTGCCT CTTGACCCGC AAAAGCCATT GGTTACAGGT GGGTGGCATG GACGAAGCGA ATTTACCGGT CGCCTTCAAC GATGTCGATT ACTGCCTGAA GCTGCGCCGC GCTGGTCTCG ATATCGTCTG GACGCCTCAT GCACGCCTTG TTCATCGTGA ATCCGTATCG CGTGGGCGGG ACGATACCGT CGAAAAGCGG CTGCGCTTTG CCGGGGAGGA GAAGGTAATG TTCGAACGCT GGTCCGACGT GATCGACAAC GATCCCTGCT ACAATCCGAA CTGCTCGCTG AGCGCTGGTG ATTTCGTGCT GGAAGCGGCC CCGCGTGACC TGTCGGCAAG GAGTGGCCGT ATCCGATGA
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Protein sequence | MAQVCAAQGP AARRLADKPV MISVHDPDGC LGPSPRLLLH RPGRVPAILK RSLIVKNSGR FLGWMPDDLD SIAVVATPAK DRVNAVRQPT VTIRTLSIAE AVLRVLIRWP HTARTLLRLL AARNVKGATF RFLRHFEALS SPRYQDWLRL RDEVDRPPAI SSSSAPLVLV SVMGAGERRS VTRKSLDRQT YRQVEFVDLE DLAGDLASRA TEKDLFWLLV PAGVTLSPLA LQWMADCLIC HPQAAGVYCD EDQTTRKGEP AVPLFKPAWN LPLVQTGWLP MDCVLLRPAC LPQPVDVTSF DANQLVIQAA AAGDILHLPR VLAHRSSPRP ALTLSRPLLR PGSSRPPVTV IIPTRDRADL LSACLDGLLG RTDHGELDII VIDNDSKEDA TRILLDRIEA EGHVRRLPMP GTFNFSRACN LGVDQARHDR ILLLNNDVEP LERDWLGEMN AELDDPQVGA VGALLLYPDG FVQHAGVTLG AGSIARHSFH FHDPDGGEDH GLLAQRRHVS AVTAACLLTR KSHWLQVGGM DEANLPVAFN DVDYCLKLRR AGLDIVWTPH ARLVHRESVS RGRDDTVEKR LRFAGEEKVM FERWSDVIDN DPCYNPNCSL SAGDFVLEAA PRDLSARSGR IR
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