Gene Avi_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1495 
Symbol 
ID7386462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1253108 
End bp1255006 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content61% 
IMG OID643650870 
Productglycosyltransferase protein 
Protein accessionYP_002549075 
Protein GI222148118 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.403758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGCGCAGG TATGCGCCGC ACAGGGTCCG GCTGCCCGCC GTCTGGCCGA TAAGCCGGTG 
ATGATTTCAG TCCATGATCC CGATGGCTGC CTTGGGCCTT CGCCGCGTCT CTTGCTTCAT
CGTCCCGGTC GGGTTCCAGC CATTCTCAAG CGTTCGCTTA TCGTGAAAAA CTCTGGCCGC
TTCCTGGGAT GGATGCCCGA CGATCTGGAC TCGATTGCCG TCGTCGCGAC ACCGGCAAAG
GACCGGGTCA ACGCAGTTCG GCAACCGACC GTCACGATCC GCACGCTGTC CATCGCCGAA
GCTGTCCTGC GGGTGCTGAT CCGCTGGCCC CATACCGCAC GCACCTTGCT CCGCTTGCTG
GCGGCGCGAA ACGTCAAGGG TGCGACGTTC CGGTTCCTCC GGCATTTCGA GGCCTTATCG
TCACCCCGCT ATCAGGATTG GCTTCGGCTG CGCGATGAGG TGGACAGGCC ACCAGCCATT
TCTAGCAGCT CGGCGCCTCT CGTTTTGGTC AGTGTTATGG GAGCGGGTGA GCGGCGGTCC
GTCACGCGCA AAAGCCTTGA TCGGCAGACT TATCGGCAAG TTGAATTTGT CGATCTGGAA
GACCTGGCCG GTGACCTGGC AAGCCGCGCG ACAGAGAAGG ATCTGTTCTG GCTGCTGGTG
CCGGCCGGCG TCACCTTGTC GCCATTGGCG CTGCAATGGA TGGCGGATTG CCTGATCTGT
CACCCGCAGG CGGCGGGGGT TTATTGCGAC GAGGACCAGA CTACCCGCAA GGGTGAGCCA
GCTGTGCCGT TGTTCAAACC AGCCTGGAAC CTGCCCTTGG TGCAAACCGG CTGGCTGCCG
ATGGACTGCG TTCTCTTGCG TCCTGCCTGC CTACCGCAAC CTGTCGATGT CACCAGTTTC
GATGCGAACC AACTCGTCAT CCAGGCAGCA GCAGCGGGGG ACATTCTTCA TCTGCCCCGC
GTTCTGGCTC ACCGATCCTC TCCGCGACCG GCTCTCACGC TATCGCGGCC CTTGCTGCGA
CCGGGCAGCT CTCGCCCGCC TGTCACCGTG ATCATTCCAA CCCGGGACCG GGCGGATCTT
CTTTCAGCCT GTCTTGATGG CCTGCTGGGT CGCACCGATC ATGGCGAATT GGATATTATC
GTCATCGACA ATGACAGCAA GGAGGATGCG ACGCGCATAC TTCTCGACAG GATCGAGGCG
GAAGGCCATG TGCGGCGCTT GCCGATGCCC GGCACCTTCA ATTTTTCCAG AGCCTGCAAT
CTCGGCGTCG ATCAGGCCCG GCATGACCGG ATTCTGCTGC TCAACAACGA TGTCGAACCG
CTGGAGCGCG ACTGGCTGGG CGAGATGAAT GCCGAGTTGG ATGATCCCCA AGTCGGGGCT
GTCGGTGCCC TGTTGCTCTA TCCCGATGGT TTTGTCCAGC ATGCCGGTGT CACGCTGGGG
GCGGGGTCCA TTGCCCGCCA CAGTTTCCAT TTTCATGATC CTGACGGTGG CGAGGATCAT
GGCCTGCTTG CGCAGCGCCG CCATGTTTCC GCCGTCACGG CGGCCTGCCT CTTGACCCGC
AAAAGCCATT GGTTACAGGT GGGTGGCATG GACGAAGCGA ATTTACCGGT CGCCTTCAAC
GATGTCGATT ACTGCCTGAA GCTGCGCCGC GCTGGTCTCG ATATCGTCTG GACGCCTCAT
GCACGCCTTG TTCATCGTGA ATCCGTATCG CGTGGGCGGG ACGATACCGT CGAAAAGCGG
CTGCGCTTTG CCGGGGAGGA GAAGGTAATG TTCGAACGCT GGTCCGACGT GATCGACAAC
GATCCCTGCT ACAATCCGAA CTGCTCGCTG AGCGCTGGTG ATTTCGTGCT GGAAGCGGCC
CCGCGTGACC TGTCGGCAAG GAGTGGCCGT ATCCGATGA
 
Protein sequence
MAQVCAAQGP AARRLADKPV MISVHDPDGC LGPSPRLLLH RPGRVPAILK RSLIVKNSGR 
FLGWMPDDLD SIAVVATPAK DRVNAVRQPT VTIRTLSIAE AVLRVLIRWP HTARTLLRLL
AARNVKGATF RFLRHFEALS SPRYQDWLRL RDEVDRPPAI SSSSAPLVLV SVMGAGERRS
VTRKSLDRQT YRQVEFVDLE DLAGDLASRA TEKDLFWLLV PAGVTLSPLA LQWMADCLIC
HPQAAGVYCD EDQTTRKGEP AVPLFKPAWN LPLVQTGWLP MDCVLLRPAC LPQPVDVTSF
DANQLVIQAA AAGDILHLPR VLAHRSSPRP ALTLSRPLLR PGSSRPPVTV IIPTRDRADL
LSACLDGLLG RTDHGELDII VIDNDSKEDA TRILLDRIEA EGHVRRLPMP GTFNFSRACN
LGVDQARHDR ILLLNNDVEP LERDWLGEMN AELDDPQVGA VGALLLYPDG FVQHAGVTLG
AGSIARHSFH FHDPDGGEDH GLLAQRRHVS AVTAACLLTR KSHWLQVGGM DEANLPVAFN
DVDYCLKLRR AGLDIVWTPH ARLVHRESVS RGRDDTVEKR LRFAGEEKVM FERWSDVIDN
DPCYNPNCSL SAGDFVLEAA PRDLSARSGR IR