Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1470 |
Symbol | pssA |
ID | 7386442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1232332 |
End bp | 1233240 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650850 |
Product | phosphatidylserine synthase |
Protein accession | YP_002549055 |
Protein GI | 222148098 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1183] Phosphatidylserine synthase |
TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAGCG ACACGCCGCA GCATCAGGCA CACCCTTCGC AAGAGCATGA GGGACCGAAA ACTCAGGCGG ATGAGAATCA GCCGGGCCAG CAGGAGGTCA ACGAGGCTTC ACGCGGGCCT CGGCTGCGGG AAATCCCCCT GCGGTTGATG ATTCCGAACC TGATTACCGT TTTGGCCATA TGCGCCGGTC TGACCGGCGT CCGCCTGGCC TTCGAAGGAC GTTTCGAGCT TGCGGTCGGC ATGGTGCTGG TCGCCGCTTT TCTCGATGGC ATCGACGGAC GCATCGCCCG CCTGATGAAA GCCACATCGA AATTCGGCGC ACAGATGGAC TCGCTTGCCG ATATCGTCAA TTTCGGCGTG GCGCCCGGTC TGGTTCTGTA TGTCTATATT CTCGACCAGG CCCGGTCCTT CGGCTGGATC GCTGCGCTGA TCTTTGCGAT ATCAGCAGGC CTGCGGCTTG CCCGCTTCAA CGTGATGGAC GAGCGCGCCA TCAAGGCCCC TTGGCAAAAC GCCTATTTCG TCGGCGTTCC GGCACCGGCT GGTGCGCTTC TGGTCATGCT GCCGATCTAT CTCGGCTTTC TGGGTGTGGA AGCCACGCCC GGATTTGCCT TTGCGTCCTC AGCCTATACG ATGCTGATCG CCTTCCTGCT GATCAGCCGC TTGCCGGTCT GGTCCGGCAA ATCTGAAAAG AAAGTCCGCC GCGATCTGGT TCTGCCCCTG ACGATCGCCG TGGTGCTCTA TGTCGCCCTG CTGATGAGCT TCACCTGGGA AGTGCTGTCG GTGACGGTTA TTGTCTATCT CCTCTCCCTG CCCTTCGGCG CCCGTGCCTG GAAGCGGAAA TACGGCACCT TGACCGTCAT GGAAGACCAC GACGACCATC ACGGCGCCGG AATGGACCGA GGCCTTTGA
|
Protein sequence | MTSDTPQHQA HPSQEHEGPK TQADENQPGQ QEVNEASRGP RLREIPLRLM IPNLITVLAI CAGLTGVRLA FEGRFELAVG MVLVAAFLDG IDGRIARLMK ATSKFGAQMD SLADIVNFGV APGLVLYVYI LDQARSFGWI AALIFAISAG LRLARFNVMD ERAIKAPWQN AYFVGVPAPA GALLVMLPIY LGFLGVEATP GFAFASSAYT MLIAFLLISR LPVWSGKSEK KVRRDLVLPL TIAVVLYVAL LMSFTWEVLS VTVIVYLLSL PFGARAWKRK YGTLTVMEDH DDHHGAGMDR GL
|
| |