| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1462 |
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| Symbol | gcvT |
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| ID | 7386435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1227933 |
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| End bp | 1228772 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650843 |
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| Product | glycine cleavage system T protein aminomethyltransferase |
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| Protein accession | YP_002549048 |
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| Protein GI | 222148091 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCCG TTTTTCTTGA AAACCGGGCT TTTCTAAAGG TCGCTGGAGC AGAGGCCGCG
CATTTTCTCA ACAATTTGCT GACAGCGGAT CTCGGCCTTA TCGAACCTGG GCAAGCCGCC
CCATCAGCAT TGCTGACCCC CCAGGGCAAG ATCCTGTTTG ACATGCTGGT CTATCCGCTG
GCCGATGGTT ATCTGCTGGA GGTGGCATCT GACGAGCAGG AGGCCCTGCT GCGCCGCCTG
ACGCTCTACA AGCTGCGCGC CGCCGTGACC CTAACCCCCG CTGAATTTTC CGGAGTCACG
GTGATCTGGG ACAACGTGCC GACCGGAGCT TTTCAGGATC GTCGTTTCGC TGCTGCCGGT
GAAACGGTCT GGCGCGTGCC GGGTCGCGTC AACTCGGCTG GGGATGATAT CAGGCTTTAT
ACAGCGCTGC GAATCAAGGC CGGGGTGGCC GAAGCGGGGC TCGACTATCC GCTTCAGGAT
GCCTATCCGC ACGACGTGCT GCTTGATCTC AATGGCGGCG TTTCGTTTAA GAAGGGCTGC
TATGTAGGCC AGGAAGTGGT GTCACGTATG CATCACCGCA AGATGGCCCG CCGCCGGATC
GCCATCGTTT CTGCTGACAC AGCCCTGCCC GCAACCGGCA CCGAGCTTCG TGCCGATGGT
AAGCCGCTTG GCACACTCGG CACGGTTTTG GACACCATCG GATTGGCGAT CCTGCGCATT
GACCGCACTG GCGATGCGAT GGCAAACGGC ACACCTATTC TGGCCGGTGA TCAAGCCGTG
CGTCTGCACC TGCCCGCCTG GACCGGCCTG GATTTTCCTG CCGCGTCAGA CGAGGACTGA
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| Protein sequence | MPAVFLENRA FLKVAGAEAA HFLNNLLTAD LGLIEPGQAA PSALLTPQGK ILFDMLVYPL
ADGYLLEVAS DEQEALLRRL TLYKLRAAVT LTPAEFSGVT VIWDNVPTGA FQDRRFAAAG
ETVWRVPGRV NSAGDDIRLY TALRIKAGVA EAGLDYPLQD AYPHDVLLDL NGGVSFKKGC
YVGQEVVSRM HHRKMARRRI AIVSADTALP ATGTELRADG KPLGTLGTVL DTIGLAILRI
DRTGDAMANG TPILAGDQAV RLHLPAWTGL DFPAASDED
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