Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1416 |
Symbol | |
ID | 7389141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1196008 |
End bp | 1196700 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643650812 |
Product | glutathione S-transferase |
Protein accession | YP_002549018 |
Protein GI | 222148061 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.664683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCGC CTATCGAGCT TTATTACTGG CCCACGCCGA ACGGCTGGAA GATTTCCATT CTCTTGGAAG AACTCGGCCT GCCCTATGAG GTGACCTACA TCAATATCGG CAAGGGCGAG CAATTCGCGC CGGATTTCCT GAAAATTTCC CCCAATAACC GTATGCCAGC GATCATCGAT CCGGACGGTC CGGGCGGAGC GCCGATATCC GTGTTCGAAT CTGGCGCCAT TCTGCAATAT CTCGGGCGCA AGACCGGCAA ATTTTACCCG ATGGACGAGC GCGCCCGAGT CGAGGTGGAT CAGTGGCTGT TCTGGCAGAT GGGCGGCCTT GGCCCGATGG CCGGACAAGC GCATCATTTC CGCCAATATG CGCCGGAAAA GATCGAATAC GGCATCAACC GCTATACCAA TGAAGTCAAT CGGCTCTATG GCGTGATGAA CAAGCGGCTG GCGGATCGGG AATTTCTGGC GGGCGATTAT TCCATTGCCG ACATGGCCTG CATCGGCTGG GTCGTACCCC ATGCCAATCA GGGACAGGAC CTCAACGATT TCCCTCATCT GAAGCGCTGG TTTGAGGCGA TGATGGAACG CCCGGCGGTC AAGGCCGGTA TTGCTGTTGG CGCCGAGCGG CGCAGCAATG TCGCCACCGA TGAGGAAGCC AAGAAAGTCC TGTTTGGCCA AAAGGCGCGA TAA
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Protein sequence | MTAPIELYYW PTPNGWKISI LLEELGLPYE VTYINIGKGE QFAPDFLKIS PNNRMPAIID PDGPGGAPIS VFESGAILQY LGRKTGKFYP MDERARVEVD QWLFWQMGGL GPMAGQAHHF RQYAPEKIEY GINRYTNEVN RLYGVMNKRL ADREFLAGDY SIADMACIGW VVPHANQGQD LNDFPHLKRW FEAMMERPAV KAGIAVGAER RSNVATDEEA KKVLFGQKAR
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