Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1411 |
Symbol | |
ID | 7389138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1191972 |
End bp | 1192880 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650809 |
Product | glycosyltransferase transmembrane protein |
Protein accession | YP_002549015 |
Protein GI | 222148058 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAGC GGGTGATGGA AGCGCTGAAG GATTTCGGCA AGCCCTGGGA ACTGATCGTC ATCGATGACG GCTCCACCGA CCGGACATTG AGCCGGGCGC AGGCCTATAT CGGTCGGGAG GGCCTGGACC TGAAAATCAT CGAATTTCAG CGCAATTTCG GCCAGGCAGC GGGCCTTCAG GCCGGTTTCG ACGCCGCACG CGGACGGCTG ATCGCGTCGC TGGACGGCGA CCTGCAAAAC GACCCGCACG ATATCCCCGG CATGATCGTA GAGTTGGAAA GCCGCGATCT GGACCTGCTC TGCGGCTGGC GCAAGGCCAG GCAGGATGCG CTTGTGCTGC GCAAGATCCC CTCCTGGTGC GCCAACCGGC TGATCGGCAA GGTCACCGGC GTGCGCATCC ATGATTATGG CTGCGGGCTG AAGCTGTACC GCGCCCATAT CATCAAACAG ATCAGCATCA TGGGCGGCAT GCACCGCTTC ATCCCGGCCT GGGTCGCCAG CGTCATTCCA TCGTCGCGGA TCGGCGAAAC TGTGGTCAAT CACCATGCCC GCCAGTTCGG CACCTCGAAA TACGGTATTT CCCGCACCGC CCGCGTCGTG CTCGATCTGC TGGCCGTGCT GTTCTTCATG CGGTTTCGGC AGAGGCCCGG CCATTTCTTC GGGATGATCG GATTTTTCAT CGGCACGATC AGCGCGCTGA TCCTGTTCTA TCTGTTCGTC ATCAAGCTGA TGGGCGAGGA TATCGGCACG CGGCCGCTGC TGCTGGTTGG CGTCATGCTG TTCCTGGCAT CGATCCAGAT GATCACCACT GGTATTGTCG CGGAAATGCT GACCCGTTCC TACGATACAC CGCGTGCCTA TGTGATCCGC AAAACCTACG ACCAGGCACC GGATACCAAG GATATCTGA
|
Protein sequence | MIERVMEALK DFGKPWELIV IDDGSTDRTL SRAQAYIGRE GLDLKIIEFQ RNFGQAAGLQ AGFDAARGRL IASLDGDLQN DPHDIPGMIV ELESRDLDLL CGWRKARQDA LVLRKIPSWC ANRLIGKVTG VRIHDYGCGL KLYRAHIIKQ ISIMGGMHRF IPAWVASVIP SSRIGETVVN HHARQFGTSK YGISRTARVV LDLLAVLFFM RFRQRPGHFF GMIGFFIGTI SALILFYLFV IKLMGEDIGT RPLLLVGVML FLASIQMITT GIVAEMLTRS YDTPRAYVIR KTYDQAPDTK DI
|
| |