Gene Avi_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1409 
Symbol 
ID7389136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1189737 
End bp1190351 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content61% 
IMG OID643650807 
Producttranscriptional regulator protein 
Protein accessionYP_002549013 
Protein GI222148056 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTTT CTCATTCACA CGAATACCAA GGGGAACATG GTGGCAGACA TGGCGGTCGA 
GGGGGCCATC CACTTGCCGA CCTGATGCAC GCGATGCGCG GTGGTCCCTT TGGACACAAG 
GGACCAGGCG GCAAGCACGG ACGCGATGGC GAACGCCGCC GGATGTTTGA GACCGGCGAA 
TTGCGGCTGG TGCTGCTGAA GCTGATTTCG GACCTGCCGC GCCATGGCTA TGACCTGATC 
CGCGAAATCG AGCGGCTCTC AGGCGGTGCC TATGCACCAA GCCCCGGCGT GATCTATCCG 
ACCATGACCC TGTTGCTGGA TATGGGCCTG GCCGAGGAAC AACAGACCGA GGGCGCCCGC 
AAATTGCTGG GTATTACCGA GGCTGGAAAA ATCCACCTCG ACGACAATGC CGAAGCGGTA 
GAGATTGCCA TCGCCCGGCT GACCGCCCTT GCCAAATTGA CCGAACGCAC CGATGCCGGG 
CCAGTGCGCC GGGCAATCCA TAATCTGCGG GCCGTGATCC ATGATCGGCT CGCCCAGGAC 
GACGTATCGC GCGAGACACA ATTGGACGTC GCGCGCATTC TCGATGAAGC AGCCAGCAAG 
ATTGAAAGGC TTTGA
 
Protein sequence
MRFSHSHEYQ GEHGGRHGGR GGHPLADLMH AMRGGPFGHK GPGGKHGRDG ERRRMFETGE 
LRLVLLKLIS DLPRHGYDLI REIERLSGGA YAPSPGVIYP TMTLLLDMGL AEEQQTEGAR 
KLLGITEAGK IHLDDNAEAV EIAIARLTAL AKLTERTDAG PVRRAIHNLR AVIHDRLAQD 
DVSRETQLDV ARILDEAASK IERL