| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1395 |
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| Symbol | cfa |
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| ID | 7389123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1173648 |
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| End bp | 1174940 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650794 |
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| Product | cyclopropane-fatty-acyl-phospholipid synthase |
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| Protein accession | YP_002549000 |
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| Protein GI | 222148043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.196126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTGC GTCCCGGAAA TGCAGACCGC TTGAAACAAC CACCAAGATT CATTTTGAAC
GCCATTTCGG ATTGGGCCTT GGCCTCGGCG TTGTCGCGCA TCGTCACCAT CGGGTGTCTG
GACATTGTCA CTGCCAGCGG CAAGACGCTG TCATTTGGTG ACCGCACGGG TGCCCCTGTC
ACGGTTCGCT TCGCCGATAC GCGCGCGCAA TGGGCTTTTC TGATCGATGC CGATATGCGG
CTGGGCGAAC TTTATATGGA TGAACGGTTC TTTGTCGATC AGGGAACCAT GTTCGATTTT
GTGTCCATGG TCCTGCGGGA GGCGCAAAAC GCCACCCATC CACTGATCGC CCGGATCATC
GACGATGTGA GGACCCGGTT CAGGATCTTT CGCCATCGCA ATCTTCCCGC CAGATCCAAA
CAGAACGTCG CGCACCATTA CGATCTGGAT GCACGGCTTT ACGAACTGTT TCTGGATGAA
GACCGACAGT ATTCCTGCGC TTATTTCGAG CACGATGATC AGAGTCTGGA TGACGCACAG
CGCGCCAAGA AAGACCATCT TGCCGCCAAG CTGCGCCTCA AGTCGGGAAA CCGTGTGCTG
GATATTGGCT GCGGCTGGGG CGGTCTCGCC CTTCATCTGG CCAATAGGGC TGTCGGCGGA
GAGGTGGTTG GCGTCACCTT GTCTGAAGAG CAGCTAGCCT ACGCGCTCAA GCGGCCCCGC
AAGCCTGCGA CTGAGGCGGC CAATGTCGAT TTCCGGTTGA TGGATTATCG CAGTCTGGAC
GGCAAATTCG ACCGCATCGT CTCGGTCGGC ATGTTCGAGC ATGTCGGTCT TGCAGCTTAT
AGGACGTTTT TCAACAAATG CAGCACGCTG CTGGCCGATG ATGGCGTGAT GGTGCTGCAC
ACGATCGGCT GTTCCGCAAC GCCGGGCTTC ACCACGCCAT GGCTCGACAA ATATATCTTC
CCTGGCGGCT ATATTCCGGC GCTCTCGGAA ATCGTTCCTG AAATCGAGAA GGCTGGCCTG
ACGATCACGG ATGTCGAGGT GCTACGCATC CACTATGCCA AGACCTTGCG CCACTGGCGT
GATCGCTTCA CCGCCCGCTG GGCAGAGGCG GCTGCCCTCT ATGACGAGCG CTTTTGCCGG
ATGTGGGACT ATTATCTTTC AACCGCCGAA GCCGCCTTCT ATCACGAGGA TCTCGTGGTC
TTCCAGATCC AGATAACCAA GAAAAACAAT GTTCTGCCGC TGACGCGGGA TTATATTCTG
ACGGATCACG AAAAGCAGGC CGCCGCCGTA TAA
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| Protein sequence | MAVRPGNADR LKQPPRFILN AISDWALASA LSRIVTIGCL DIVTASGKTL SFGDRTGAPV
TVRFADTRAQ WAFLIDADMR LGELYMDERF FVDQGTMFDF VSMVLREAQN ATHPLIARII
DDVRTRFRIF RHRNLPARSK QNVAHHYDLD ARLYELFLDE DRQYSCAYFE HDDQSLDDAQ
RAKKDHLAAK LRLKSGNRVL DIGCGWGGLA LHLANRAVGG EVVGVTLSEE QLAYALKRPR
KPATEAANVD FRLMDYRSLD GKFDRIVSVG MFEHVGLAAY RTFFNKCSTL LADDGVMVLH
TIGCSATPGF TTPWLDKYIF PGGYIPALSE IVPEIEKAGL TITDVEVLRI HYAKTLRHWR
DRFTARWAEA AALYDERFCR MWDYYLSTAE AAFYHEDLVV FQIQITKKNN VLPLTRDYIL
TDHEKQAAAV
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