| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1393 |
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| Symbol | |
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| ID | 7389122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1172247 |
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| End bp | 1173350 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650793 |
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| Product | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase protein |
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| Protein accession | YP_002548999 |
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| Protein GI | 222148042 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGCCG CAACTGCAAA GCCGGAATTC ATCGTCAAGC CGAACGCAAA CCCTATGCCG
GAAGCAGAGC GCCTTGAGGC GTTCCAGAGC CTGGGCTTTG GTACGCTGTT CAGCGACCAT
ATGGCGGTGA TTCAGTGGAA TGTGGTGAAG GGCTGGCATT CGGCGGAGAT TACCGCGCGC
GGGCCATTTG CCATCGATCC GGCAGCCGCG GTGCTGCATT ACGCCCAGGA AATTTTTGAG
GGCATGAAGG CGTATCGGAC GGCGGAAGGT CGTGTCGTGC TGTTTCGCCC GGACGAAAAT
GCCCGCCGTT TCAACGAGTC TGCACGGCGC ATGGCGATGC CGGAAATTCC TGAGGAGCTG
TTTCTCGAAG CCATCGATAA ATTGGTCAAG GCCGATGCGA AGTGGATTCC AGACGGTGAG
GGCAGCCTCT ACCTGCGGCC TTTCATGTTT GCCAGCGAAG CTTTTCTGGG TGTGCGCCCG
GCGCGCGATT ATATTTTCTG CGTCATCGCC TCGCCGGTCG GCCCCTATTT CAAGGGCGGC
GCCAAGGCGG TGAAGATCTG GGTTTCGGAA AACTACACCC GCGCAGCCCC CGGCGGCACG
GGTGCCGCCA AATGCGGCGG CAATTATGCG GCAAGCCTGA TTGCCCAGCA GGAAGCGGTT
GAGCATGGCT GCGATCAGGT GGCCTTCCTG GATGCCGCCG AGCATAAATG GCTGGAAGAG
CTGGGCGGCA TGAACGTGTT TTTCGTCATG GACGATGGTT CGCTGGTGAC GCCGCCTCTA
GGCGGCACCA TCCTGCCGGG CATTACCCGT AATTCGTTGA TCTCGCTCAT CAAAGACCAA
GGCATGAAAG TGCATGAACG CCCGTATTCT TTCGAGGAAT GGCAGGCGGA TGCCAAAAGC
GGCAAGCTGA AAGAAGCCTT CGCCTGCGGC ACGGCCGCTG TGGTGGCTGG CATCGGCGAG
GTCAAATTCA CCGATGGTGG CTTTGTGATC GGCAATGGCG AAACCGGGCC AGCCACCCTG
AAAATCCGCG AGCAACTGGT CAATATCCAG CGCGGCAAGA GCAATGACCC GCATGGCTGG
GTCCGCCGGA TCGAAGGCGT CTGA
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| Protein sequence | MSAATAKPEF IVKPNANPMP EAERLEAFQS LGFGTLFSDH MAVIQWNVVK GWHSAEITAR
GPFAIDPAAA VLHYAQEIFE GMKAYRTAEG RVVLFRPDEN ARRFNESARR MAMPEIPEEL
FLEAIDKLVK ADAKWIPDGE GSLYLRPFMF ASEAFLGVRP ARDYIFCVIA SPVGPYFKGG
AKAVKIWVSE NYTRAAPGGT GAAKCGGNYA ASLIAQQEAV EHGCDQVAFL DAAEHKWLEE
LGGMNVFFVM DDGSLVTPPL GGTILPGITR NSLISLIKDQ GMKVHERPYS FEEWQADAKS
GKLKEAFACG TAAVVAGIGE VKFTDGGFVI GNGETGPATL KIREQLVNIQ RGKSNDPHGW
VRRIEGV
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