Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1350 |
Symbol | |
ID | 7389092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1128866 |
End bp | 1129501 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650763 |
Product | hypothetical protein |
Protein accession | YP_002548969 |
Protein GI | 222148012 |
COG category | [S] Function unknown |
COG ID | [COG5448] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02217] conserved hypothetical protein TIGR02217 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00122834 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCG CCTTTCACGA GGTGCGCTTT CCGCTGCGCG TGTCGCTCTC GACCAGCGGC GGGCCGGTGC GGCGCACGGA TATTGTCAAC CTGTCGAATG GCCGCGAAGT GCGCAACCAG CGCTGGGCCA ATTCGCGCCG CAGCTATGAT GCCGGGTCGG GGGTGAAATC GCTTGCCGAT CTCTACACGG TGCTGGAGTT TTTCGAGGCG CGTGGCGGCC AGATGGCCGG GTTCCGGTTT CGAGATCCGC TGGATTCCAA TTCCGCCGGG CCGGGGCGGG CCGTGAGTGC TGAAGACCAA AAGATCGGCA CCGGCGATGG CGTGACCGCC AGCTTTCAAC TGGTCAAGAC CTATGGCGAT GCCGGTGGCG GCTGGAGCCG CAGCATTGCC AAGCCAGTTG ATGGCACCGT GCTGATTTCG GTGGATGGCG TGCCGGTCAA CGGTTTCAAC TGCGATAGCA CCACCGGGCT AGTGTCCTTC AATCAGGATT TTATTCCTGC CTCCGGTGCC GTCATCCGGG CGGGCTTTCA ATTCGATGTG CCGGTGCGTT TCGATACCGA CCGGATCGAA ATCAATCTCG AAGCCTTCAA TGCTGGCAGC ATTCCTTCGA TTTCGCTGAC GGAGATCATT CCATGA
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Protein sequence | MATAFHEVRF PLRVSLSTSG GPVRRTDIVN LSNGREVRNQ RWANSRRSYD AGSGVKSLAD LYTVLEFFEA RGGQMAGFRF RDPLDSNSAG PGRAVSAEDQ KIGTGDGVTA SFQLVKTYGD AGGGWSRSIA KPVDGTVLIS VDGVPVNGFN CDSTTGLVSF NQDFIPASGA VIRAGFQFDV PVRFDTDRIE INLEAFNAGS IPSISLTEII P
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