Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1346 |
Symbol | |
ID | 7389089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1127579 |
End bp | 1127998 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643650760 |
Product | hypothetical protein |
Protein accession | YP_002548966 |
Protein GI | 222148009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000547988 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGGG GGACGGGGAA TGTTAGTATG GGCGTGCGCG CCAACCGCAG GCGCGGCGAA GTGGAAGCGG TGATTGATGG CGAGCGGCGG ATTTTATGCC TGACGCTGGG CGCGCTGGCC GAACTGGAAA CCGCCTTTGC CGCCGACAGT CTGGCGGATC TTGCCCTGCG GTTTTCCAGT GGCAAGCTTT CCAGCCGCGA CCTGATCCGC ATTCTGGCGG TCGGTTTGCG GGGCGGCGGC AATTGTTGCG CCGATGAGGA TGTCGCCGAC ATGTGCGTCG AGGGTGGGCT TGCGGCCTGC GTCGCCATTG TCCGCGAATT GCTGCTCGTT ACGTTTGGAA CTGCTGATCA GGCGGCTTCG ACCGGCCACA CCTCGACCGG CCACGCCCCG GCCATGGAGG GCGATCCCGC CCGCCCTTGA
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Protein sequence | MNGGTGNVSM GVRANRRRGE VEAVIDGERR ILCLTLGALA ELETAFAADS LADLALRFSS GKLSSRDLIR ILAVGLRGGG NCCADEDVAD MCVEGGLAAC VAIVRELLLV TFGTADQAAS TGHTSTGHAP AMEGDPARP
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