| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1345 |
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| Symbol | |
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| ID | 7389088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1127172 |
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| End bp | 1127582 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650759 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548965 |
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| Protein GI | 222148008 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5437] Predicted secreted protein |
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| TIGRFAM ID | [TIGR02126] phage major tail protein, TP901-1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00292894 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGGCCC AGAGGGGTAA GGACCTGCTG CTGAAGATTA TCAGCGGCAG CGATTATATA
ACCGTTGCAG GACTGCGTTC GCGCAAACTG GCTTTCAATG CCGAAACCGT CGATGTGACC
GATGCCGACA GCGCCGGGCG CTGGCGTGAG CTTTTGGCCG GTGCCGGTGC CAAACGCGCC
TCGCTATCGG GGGCCGGGTT GTTCAAGGAC CAGTCCTCCG ATGAACTGGT CCGGGCGGCG
TTTTTTGCCG GTTCGGTGTT GAGCTGGCAG GTGGTGATCC CGGCTTTTGG CACGGTGACT
GGCCTGTTTC AGGTGACAGC GCTGGACTAT TCCGGCGAGC ATGACGGCGA GTTGAAATTC
GACATCGCGC TGGAATCGGC AGGGGCGATT GCCTTTGAGG TGACGTCATG A
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| Protein sequence | MVAQRGKDLL LKIISGSDYI TVAGLRSRKL AFNAETVDVT DADSAGRWRE LLAGAGAKRA
SLSGAGLFKD QSSDELVRAA FFAGSVLSWQ VVIPAFGTVT GLFQVTALDY SGEHDGELKF
DIALESAGAI AFEVTS
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