| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1334 |
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| Symbol | |
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| ID | 7389080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1120420 |
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| End bp | 1121622 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643650751 |
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| Product | phage portal protein HK97 family |
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| Protein accession | YP_002548957 |
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| Protein GI | 222148000 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00597949 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCTT CCTTTCGCCT GCCGTTTCGG CGGGCCAATC GTGCTGCTGT GTCGTCGGCG
ACGCCAACAC AGACAAAAGC GGGGATACGA CCCCGTGCAG GATTGGAAAT GCTGCTCTCC
ACCGGTGCCG GGCGCGGCAC GGGGCGGTCT TATGCAGCCT TGTCACGCGC TGGCTTTCTC
GGCAATCCGG TGGCGCATCG GGCGGTGCGG CTGGTGGCGG AGGCAGCGGC CGCTGTGCCG
CTTCTGCTTT ATCAGGGCCT GCCGCAGGAA GGGGCGGGCG AGTTGAGCGA GCATCCGGCG
CTGGCGCTTC TGGCCCGGCC CAATGGGCGG GCGACGGGGG CGGATTTTTT CGAAATGCTC
TATGGCCATC TGCTGCTGTC GGGCAATGCC TATCTGGAGC CGCTCTGGCT TGGCGGGCGG
CTGATGGAAC TGCATCTGCT GCGCCCCGAT CGGGTCAGCG TCGTCGAGGG TCCCGATGGC
TGGCCGGTGG CTTATGATTA TCGTGCCGCC GGGGTGACGC GCCGGGTTGC TGCCGAGGGC
GAGCCGCAGC CGATCCTGCA TTTCAAGCTG TTTCACCCGC TCGACGATAT CAGCGGTTAT
GCGCCGCTCG CTTCGGCCCA TAACGCGCTG GATCTGCACA ATGCCGCCGC CACCTGGAAC
AAGGCGCTGC TCGACAATTC CGCCCGTCCC TCCGGGGCGC TGGTCTATCA GCCCAAGGAG
GGTGGTAACC TGCCACCGGA ACAATATCAG CGGCTGAAGG ACGAGCTGGA ACAGGGCTAT
TCCGGGCCAA TGCAGGCGGG CCGCCCGATG CTGCTGGAGG GCGGGCTGGA CTGGAAGGCG
ATGAGCTTGA CCCCCCGCGA CATGGATTTT ACCGATGCCC GCAATGGCGC GGCCCGCGAT
ATTGCCTTGT CGCTCGGCGT ACCGCCGATG CTGCTAGGCA TTCCCGGCGA CAATACCTAC
GCCAATTATC AGGAGGCCAA CCGCGCCTTC TACCGGCTGA CGGTGCTGCC GCTGATCCGC
CGCACCGCCG CCAGCCTGTC GGGCTTTCTG TCCGATGGGT TTGGCGAGGT CTTGTGCCTG
AAGCCTGATC TCGATCAGGT CGAGGGCCTG TCCAGCGAGC GTGACGCGCT GTGGTCGCGG
GTAGGCTTTG CCAGCTTCCT CACCGACGAG GAAAAGCGGC AGGCGGTTGG ATATGACGCT
TAA
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| Protein sequence | MLSSFRLPFR RANRAAVSSA TPTQTKAGIR PRAGLEMLLS TGAGRGTGRS YAALSRAGFL
GNPVAHRAVR LVAEAAAAVP LLLYQGLPQE GAGELSEHPA LALLARPNGR ATGADFFEML
YGHLLLSGNA YLEPLWLGGR LMELHLLRPD RVSVVEGPDG WPVAYDYRAA GVTRRVAAEG
EPQPILHFKL FHPLDDISGY APLASAHNAL DLHNAAATWN KALLDNSARP SGALVYQPKE
GGNLPPEQYQ RLKDELEQGY SGPMQAGRPM LLEGGLDWKA MSLTPRDMDF TDARNGAARD
IALSLGVPPM LLGIPGDNTY ANYQEANRAF YRLTVLPLIR RTAASLSGFL SDGFGEVLCL
KPDLDQVEGL SSERDALWSR VGFASFLTDE EKRQAVGYDA
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