| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1328 |
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| Symbol | cueR |
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| ID | 7389076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1115984 |
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| End bp | 1116412 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650747 |
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| Product | Cu(I)-responsive transcriptional regulator |
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| Protein accession | YP_002548953 |
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| Protein GI | 222147996 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.185828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATCG GAGAAGCCGC CGCAGCCTCC GGCGTTTCTG CGAAGATGAT CCGCTACTAT
GAGGAAATCG GGCTGGTTTT GCCGGCGCGG CGCACCTCAA GCAATTATCG GGTCTATGGC
GAAAATGAAG TCCACCGTCT GCGCTTTGTG CGGCGGGCGC GGACCCTCGG GTTTTCCCTG
GAGGAAACGG AGCGGTTGCT GGCGCTGTGG AGCGACTCTG GCCGCAAAAA CGACGATGTG
CGCCAGGTGG CCATGAACCA TCTGCGCGAA CTCGAAGACA AGATGGAAGC CATGCAGGCC
ATGGTCGACA CGTTGAAAAA CCTGGTTGAT CACTGCGAGC AGGGCGACCG CCCGGATTGC
CCGATCCTGG AAAAGCTGGG TGGTTCTTCC ACGCACAATA GCCGCAAGGT GGAAATGGAA
GAGGCCTGA
|
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| Protein sequence | MNIGEAAAAS GVSAKMIRYY EEIGLVLPAR RTSSNYRVYG ENEVHRLRFV RRARTLGFSL
EETERLLALW SDSGRKNDDV RQVAMNHLRE LEDKMEAMQA MVDTLKNLVD HCEQGDRPDC
PILEKLGGSS THNSRKVEME EA
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