| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1201 |
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| Symbol | |
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| ID | 7387594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1013397 |
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| End bp | 1015583 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650655 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002548861 |
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| Protein GI | 222147904 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGC CAGTGCAATC GGTTTCAGCA AAGCTTCTGC TGGCGGCAGG GGTCGTGATA
ACGATCTCTC TGGGCGGCTT CTCAATTGTC GGCATATTTG CTACCAAAAC CCAACTGAGT
GACAATATCG TCGCTGTGGC AACGCAAAAG GCCGAGCTTG CCTCCAGGCA GGTAACCGCA
GATATTACCA ATGTGGTTTC CTCAGCGACC AGCGTCGCGG CAAGCCTGTC GGGATTGATT
GAAAACGGCG CAGGCAGCCG CGCCGATGTC ATCGCCTCGC TGAAAAACAT TCCGCCCCAA
TATCCAAGCA TGTTCGGCGC TTGGATGACC GAATTGCCTG ATGTCCCGGC GGACCTCAAA
CTGCAAGGCG CTGAGGGCAC CAACAAACAG GGTCGGTTCA CAGCCTATTG GACCAAGGAC
GACAGCGGCA AGCTGGGATT TTCCACCTGG GAGATCAAAA CCACCGATCA ATGGTATGCC
GAACCTCTGG CAACCGGCAA GAGCTTGATC ACCCAGCCTT ATATCTCGAC CACCGGTCAG
TTGCTGACAT CGGTATCCTT GCCGGTAAGG GTGAATGGCA AGATTGTCGG CCTGGCGGGC
GTCGACGTGA AGCTGGACGA TCTTGCCGCG ACAATCAGCG CTTTGCGGCC CTTCGAAGAT
GGCCGCATCA TGCTGCTGGC CGATAACGGC AAATGGCTTG TGAATGCCGA CAAGTCCCTG
ATGATGAAGG ACTATGCCGA TACCGGGGCT GCCGAGGTCA AGGCGGCGCT TGCCGATGGC
AAGACGCGCG TCATCCATGG TCTGCCGGAT GGCGCGACAC GCATTGTCTT TCCCTTTACC
AGCCCCGGCA TGAACAAGAC CTGGGCCACG GTGCTGGACA TTCCGGAAAA GACCTTCACA
GGCCCGATCA AGGAACAGAT CATCGCCATA TCCTCCAGTT GCCTGATCAT GCTGACGATC
GGTCTTTGCC TGATTTATTT TGTCTCGACG TTGATTGTAC GCCGCCCATT GGCAAATGTG
GTGGCAGGTG TGCGTGTGAT GGCCGGTGGC GATTACAATA AACCGATTGC CGGAACGGAG
CGTCACGACG AATTTGGCAC CTTGGCGACA GCACTCGACC AGTTCCGCCG AGAACTCTCC
AATGGCCTGC GCGTGCAGCA GGAGCAGGAT TCCCTGCGCA AAAGCGTGGA ACAGGACCGG
GAACGCCAGA GCGCGCTGGA AAAGGCCAAG GCTGCGGATT TGCTGCAATT TGTCCAGCAG
GTCCAGGCTG GCTTCAATGC CCTGGCAGCA GGCGATCTGA CCGTGCGCAT GCAGGACAAT
GTCGCACCGG AATTCGAATC CATCCGCCAG AATTTCAACA CCTCGGTGGC AAGCCTTGAA
GAAGCGATCG GCGCCGTTGT TCACGCAATT GGCACGATCC GGTCCGGTCT TGGCGAAATC
TCGGCCGCCT CCAACGATCT GGCGCGGCGC ACCGAACAGC AGGCCGCATC GCTGGAAGAA
ACCATTGCAG CACTCGGCGA TGTGTCACGC GCCATCGACG GCACAGCCGA CGGGGCTGGC
CGGGCGCAGA CGGTCGTCAC CGCCACTCGC GACAATGCCG CCAAGGGCGG AGATATTGTC
TCCCGCGCCA TCGAGGCGAT GACCGCCATC CAGGGCTCAT CCGAAAAGAT CGGCAATATC
ATCGGCGTCA TCGACGAAAT TGCCTTCCAG ACCAATCTTC TGGCCCTGAA TGCAGGGGTG
GAAGCGGCCC GCGCCGGGGA ATCCGGCAAG GGTTTTGCCG TGGTGGCGCA GGAAGTGCGC
GAACTCGCCC AGCGCTCCGC CAATGCGGCC CGCGAAATCA AGACGCTGAT CTCCACCTCC
AGCGCCCAGG TTGAAACCGG GGTCCATCTC GTCAGCGCCT CGGGGACCTC GTTGCAACAG
ATTGTCGACC AGGTCGCCAA TATGAGTTCG ACAATCACAG ACATTGCCAA TTCAGCCCGC
GAACAGGCTA CATCGCTGCG CGAAGTGACG AATGCGGGCG ATGTCATGGA CAAGGTCACC
CAGCAGAATG CCGCCATGGT GGAAGAAACC ACCGCCGCAG CCCAGAACCT TGCCCAGGAA
ACCGAAAATC TTGCTCATAT GGTCCGGCGT TTCCGGACCA ATTCCGCCAA TTCCAGCCAG
CCCCAGCGCT ACGCCAAGGC GTCGTGA
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| Protein sequence | MKMPVQSVSA KLLLAAGVVI TISLGGFSIV GIFATKTQLS DNIVAVATQK AELASRQVTA
DITNVVSSAT SVAASLSGLI ENGAGSRADV IASLKNIPPQ YPSMFGAWMT ELPDVPADLK
LQGAEGTNKQ GRFTAYWTKD DSGKLGFSTW EIKTTDQWYA EPLATGKSLI TQPYISTTGQ
LLTSVSLPVR VNGKIVGLAG VDVKLDDLAA TISALRPFED GRIMLLADNG KWLVNADKSL
MMKDYADTGA AEVKAALADG KTRVIHGLPD GATRIVFPFT SPGMNKTWAT VLDIPEKTFT
GPIKEQIIAI SSSCLIMLTI GLCLIYFVST LIVRRPLANV VAGVRVMAGG DYNKPIAGTE
RHDEFGTLAT ALDQFRRELS NGLRVQQEQD SLRKSVEQDR ERQSALEKAK AADLLQFVQQ
VQAGFNALAA GDLTVRMQDN VAPEFESIRQ NFNTSVASLE EAIGAVVHAI GTIRSGLGEI
SAASNDLARR TEQQAASLEE TIAALGDVSR AIDGTADGAG RAQTVVTATR DNAAKGGDIV
SRAIEAMTAI QGSSEKIGNI IGVIDEIAFQ TNLLALNAGV EAARAGESGK GFAVVAQEVR
ELAQRSANAA REIKTLISTS SAQVETGVHL VSASGTSLQQ IVDQVANMSS TITDIANSAR
EQATSLREVT NAGDVMDKVT QQNAAMVEET TAAAQNLAQE TENLAHMVRR FRTNSANSSQ
PQRYAKAS
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