Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1179 |
Symbol | |
ID | 7386235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 999404 |
End bp | 1000036 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650641 |
Product | nitroreductase |
Protein accession | YP_002548847 |
Protein GI | 222147890 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCTTG ATAAATTGAA CTGGCGTTAT GCCGCCAAGA AAATGGACCC GTCGAAGACT GTTGCTGAAG ACAAGGTCGA GCGTATTGTC GAGGCGGCCC GGCTGGCACC GACCTCCAGC GGCTTGCAGC CGTTTTCCGT GCTTGTCGTA ACCAACAAGG AGATCCGCGA GCGGATCAAG CCGATCGCCT GGAACCAGGG CCAGATTACC GATTGCTCGC ATCTGCTGGT GTTTGCCGCC TGGGACAATT ACACCGCAGA GCGGATCAAC ACGATGTTTG ATCTCACCAA TGCCGAGCGC AATTTTACCA ATGAAGGCTG GGAAAACTAT CGCAAGATGC TGCTGGATAC CTATCCACCA CGCGACGCCG AAGTGAATTT CGAACATGCC GCCCGCCAGG CCTATATCGC ATTGGGGCTG GCACTGACGG CTGCTGCCTT CGAAGAGGTC GATTCAACCC CGATGGAAGG CTTTGACCCG GCAGCGCTGG ACGAAATCCT CGACCTACGC GCCAAGGGCC TGCGCTCCGT CGCCATCCTG CCGCTGGGCT ATCGTCAGCC GGATGGCGAC TGGCTGGTCA ACCTGAAAAA AGTCCGCCGC GCCCGTGAAG ATTTTGTCAT CGAGGTGAAG TGA
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Protein sequence | MLLDKLNWRY AAKKMDPSKT VAEDKVERIV EAARLAPTSS GLQPFSVLVV TNKEIRERIK PIAWNQGQIT DCSHLLVFAA WDNYTAERIN TMFDLTNAER NFTNEGWENY RKMLLDTYPP RDAEVNFEHA ARQAYIALGL ALTAAAFEEV DSTPMEGFDP AALDEILDLR AKGLRSVAIL PLGYRQPDGD WLVNLKKVRR AREDFVIEVK
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